[R] Updating to nlme 3.1-62 failing from source (OS X)

Michael Kubovy kubovy at virginia.edu
Sun Jul 31 19:48:54 CEST 2005


R Version 2.1.1  (2005-06-20); R Cocoa GUI 1.12 (1622);  Mac OS X  
10.4.2 (8C46)

For nlme, the R package installer for CRAN (binaries) gives 3.1-60 as  
Repository Version as well as Installed Version.
For CRAN (sources) it gives 3.1-62 as Repository Version and 3.1-60  
as Installed Version.

When I try to update nlme, I get

* Installing *source* package 'nlme' ...
** libs
gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ 
include  -I/usr/local/include   -fno-common  -g -O2 -c corStruct.c -o  
corStruct.o
/var/tmp//ccOTBSDa.s:6088:** Removing '/Library/Frameworks/ 
R.framework/Versions/2.1.1/Resources/library/nlme'
** Restoring previous '/Library/Frameworks/R.framework/Versions/2.1.1/ 
Resources/library/nlme'

The downloaded packages are in
     /private/tmp/RtmpL1j8Sa/downloaded_packages
Unknown pseudo-op: .p2align
/var/tmp//ccOTBSDa.s:6088:Rest of line ignored. 1st junk character  
valued 50 (2).
/var/tmp//ccOTBSDa.s:6414:Unknown pseudo-op: .p2align
/var/tmp//ccOTBSDa.s:6414:Rest of line ignored. 1st junk character  
valued 50 (2).
/var/tmp//ccOTBSDa.s:6608:Unknown pseudo-op: .p2align
/var/tmp//ccOTBSDa.s:6608:Rest of line ignored. 1st junk character  
valued 50 (2).
/var/tmp//ccOTBSDa.s:7111:Unknown pseudo-op: .subsections_via_symbols
make: *** [corStruct.o] Error 1
ERROR: compilation failed for package 'nlme'


_____________________________
Professor Michael Kubovy
University of Virginia
Department of Psychology
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         McCormick Road    Charlottesville, VA 22903
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