[R] Failing to install Hmisc on Mac OS 10.3.9, R Version 2.1.0 Patched (2005-05-12)

[Michael Kubovy]

Kindly cc me when replying to the list.

trying URL  
'http://www.biometrics.mtu.edu/CRAN/src/contrib/Hmisc_3.0-6.tar.gz'
Content type 'application/x-gzip' length 462535 bytes
opened URL
==================================================
downloaded 451Kb

* Installing *source* package 'Hmisc' ...
** libs
g77   -fno-common  -g -O2 -c cidxcn.f -o cidxcn.o
g77   -fno-common  -g -O2 -c cidxcp.f -o cidxcp.o
g77   -fno-common  -g -O2 -c hoeffd.f -o hoeffd.o
g77   -fno-common  -g -O2 -c jacklins.f -o jacklins.o
g77   -fno-common  -g -O2 -c largrec.f -o largrec.o
gcc-3.3 -no-cpp-precomp  
-I/Library/Frameworks/R.framework/Resources/include   
-I/usr/local/include   -fno-common  -g -O2 -c ranksort.c -o ranksort.o
g77   -fno-common  -g -O2 -c rcorr.f -o rcorr.o
g77   -fno-common  -g -O2 -c wclosest.f -o wclosest.o
gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o  
Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o ranksort.o  
rcorr.o wclosest.o  -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2  
-lg2c -lSystem -lcc_dynamic -framework R
** R
** preparing package for lazy loading
Error in dyn.load(x, as.logical(local), as.logical(now)) :
	unable to load shared library  
'/Library/Frameworks/R.framework/Resources/library/grDevices/libs/ 
grDevices.so':
   dlcompat: dyld: /Library/Frameworks/R.framework/Resources/bin/exec/R  
version mismatch for library: /usr/local/lib/libxml2.2.dylib  
(compatibility version of user: 9.0.0 greater than library's version:  
8.0.0)
Loading required package: grDevices
Error in dyn.load(x, as.logical(local), as.logical(now)) :
	unable to load shared library  
'/Library/Frameworks/R.framework/Resources/library/grDevices/libs/ 
grDevices.so':
   dlcompat: dyld: /Library/Frameworks/R.framework/Resources/bin/exec/R  
version mismatch for library: /usr/local/lib/libxml2.2.dylib  
(compatibility version of user: 9.0.0 greater than library's version:  
8.0.0)
In addition: Warning message:
package grDevices in options("defaultPackages") was not found
** Removing  
'/Library/Frameworks/R.framework/Versions/2.1.0/Resources/library/ 
Hmisc'
** Restoring previous  
'/Library/Frameworks/R.framework/Versions/2.1.0/Resources/library/ 
Hmisc'
Error: package 'grDevices' could not be loaded
Execution halted
ERROR: lazy loading failed for package 'Hmisc'

When I try install.packages("grDevices")
Warning message:
no package 'grDevices' at the repositories in: download.packages(pkgs,  
destdir = tmpd, available = available,

_____________________________
Professor Michael Kubovy
University of Virginia
Department of Psychology
USPS: 	P.O.Box 400400	Charlottesville, VA 22904-4400
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