[R] pdf font embedding --- again

ivo_welch-rstat8303@mailblocks.com ivo_welch-rstat8303 at mailblocks.com
Tue Aug 30 02:09:10 CEST 2005


Hi Paul:

You are correct.  it was the same little bug I hit on.  Specifying the 
full (not the symlinked) afm filenames lets me run the code.  No R 
error.  yoohoo!

alas, the files don't seem to come out right.  I can use these commands 
on the R postscript() and on the R pdf() device.  they have an effect 
on both.  (that is, if I grep for lucida in the resulting ps or pdf 
file, respectively, the word lucida appears in both files).  alas, 
usage is another story:

$ pdffonts tonativepdf.pdf
name                                 type         emb sub uni object ID
------------------------------------ ------------ --- --- --- ---------
ZapfDingbats                         Type 1       no  no  no       5  0
Helvetica                            Type 1       no  no  no      10  0
Helvetica-Bold                       Type 1       no  no  no      11  0
Helvetica-Oblique                    Type 1       no  no  no      12  0
Helvetica-BoldOblique                Type 1       no  no  no      13  0
Symbol                               Type 1       no  no  no      14  0
LucidaBright                         Type 1       no  no  no      15  0
LucidaBright-Demi                    Type 1       no  no  no      16  0
LucidaBright-Italic                  Type 1       no  no  no      17  0
LucidaBright-DemiItalic              Type 1       no  no  no      18  0
LucidaNewMath-Symbol                 Type 1       no  no  no      19  0

This is not so great.  I had hoped to get rid of the Helvetica fonts 
here.   Moreover, if I run my "firsttops.ps" file through ps2pdf12, I 
see

$ ps2pdf12 firsttops.ps firsttops.pdf ;  pdffonts firsttops.pdf
name                                 type         emb sub uni object ID
------------------------------------ ------------ --- --- --- ---------
Helvetica                            Type 1       no  no  no       9  0

So, it seems that the lucida font is not used, and therefore optimized 
away.

regards,

/ivo


---
ivo welch

-----Original Message-----
From: Paul Murrell <p.murrell at auckland.ac.nz>
To: ivo_welch-rstat8303 at mailblocks.com
Cc: ripley at stats.ox.ac.uk; r-help at stat.math.ethz.ch
Sent: Tue, 30 Aug 2005 11:49:38 +1200
Subject: Re: [R] pdf font embedding --- again

Hi

 ivo_welch-rstat8303 at mailblocks.com wrote:
  > > > Ooops. hit the button too soon. I have tried as arguments 
variation of > the fonts and family arguments to postscript, such as 
getting the case > right (i.e., lucida rather than Lucida). Alas
 > > > postscript(file="test.ps", fonts="lucida");
  > *** glibc detected *** free(): invalid pointer: 0x0000000000f7dfb8 
***
  > > this is under R 2.1.1, 2005-06-20, built under gentoo from 
scratch.
  > > so, the problem is probably now internal, not the commands. I 
guess I > will now investigate glibc in a little more detail...

  You might just be tickling the segfault you reported earlier (which 
appears to happen [sometimes] when R cannot find the AFM files).
 Try ...

 afmfiles <- c("/usr/share/texmf/fonts/afm/yandy/lubright/lbr.afm",
 "/usr/share/texmf/fonts/afm/yandy/lubright/lbd.afm",
 "/usr/share/texmf/fonts/afm/yandy/lubright/lbi.afm",
 "/usr/share/texmf/fonts/afm/yandy/lubright/lbdi.afm",
 "/usr/share/texmf/fonts/afm/yandy/lubright/lbms.afm")

 Paul

 > -----Original Message-----
 > From: Paul Murrell <p.murrell at auckland.ac.nz>
 > To: Paul Murrell <paul at stat.auckland.ac.nz>
  > Cc: ivo_welch-rstat8303 at mailblocks.com; ripley at stats.ox.ac.uk; > 
r-help at stat.math.ethz.ch
 > Sent: Tue, 30 Aug 2005 10:04:11 +1200
 > Subject: Re: [R] pdf font embedding --- again
 > > Hi
 > > Paul Murrell wrote:
 > > Hi
 > > > I think there are two problems:
 > > > (i) You are specifying the font incorrectly. Try ...
 > > > # You might need to specify full paths to these
  > > afmfiles <- c("lbr.afm", "lbd.afm", "lbi.afm", "lbdi.afm", 
"lbms.afm");
 > > # Set up the mapping for "lucida" font family
 > > postscriptFonts(lucida=postscriptFont("Lucida", metrics=afmfiles))
 > > # Specify that the "lucida" font is to be used
 > > postscript(file="test.ps", family="lucida");
 > > Thanks to Brian Ripley for pointing out that that should be ...
 > > postscript(file="test.ps", fonts="lucida");
 > > > l<- 40:80;
 > > plot(l,l,pch=l);
 > > dev.off();
 > > > Should work for pdf() too.
  > > > This should put a reference to the appropriate font in the > 
PostScript or > PDF file that R creates.
  > > > (ii) R does not embed font information. But you can, for 
example, > use > ghostscript to do it, as long as you tell ghostscript 
about the > font > too. You might have to set up a file 'FontMap' which 
looks > something > like ...
 > > > /Lucida (PATH_TO/lb___.pfb);
  > > > ... (assuming that lb___.pfb is the name of the .pfb file for 
the > Lucida > font). Then try something like (NOTE that you have to 
specify
 > >> GS_FONTPATH to tell ghostscript where your FontMap file is) ...
  > > > > GS_FONTPATH=PATH_TO_FontMap gs -dBATCH -dNOPAUSE 
-sDEVICE=pdfwrite
 > >> -sPAPERSIZE=a4 -sOutputFile=testembed.pdf test.pdf
  > > > > This should give you a file with the font info embedded and 
then > you > should be able to include that in a LaTeX document.
 > > > Paul
  > > > p.s. Thanks for the segfault report. I will look at why that is 
> happening.
 > > > > ivo_welch-rstat8303 at mailblocks.com wrote:
 > > >> Thank you---as always.
 > >>
 > >> still, I remain font-desparate.
 > >>
  > >> I would love to use the fonts from my book, but [a] I cannot 
figure > >> out how to do this yet even in the R postscript device; and 
[b] I am > >> using the R pdf device, not the postscript device. I 
guess if I can > >> solve [a], then I can rewrite all my graphics 
creations now into the > >> postscript device, and replace the 
dev.off() with something that >> > follows it with ps2pdf. The 
following attempt, however, does not work:
 > >>
  > >> afmfiles <- c("lbr.afm", "lbd.afm", "lbi.afm", "lbdi.afm", >> > 
"lbms.afm");
 > >> Lucida <- postscriptFont("Lucida", metrics=afmfiles);
 > >> postscript(file="test.ps", family=Lucida);
 > >> l<- 40:80;
 > >> plot(l,l,pch=l);
 > >> dev.off();
 > >>
  > >> By the way, if I try " postscript(family=afmfiles);" then I do 
not > >> get an R error, but R 2.1.0 segfaults, which is probably not 
 >> > desirable. This occurs even if there is no .afm file in the 
current >> > directory.
 > >>
 > >>
  > >> Can I make a suggestion to the R team? It would be nice if I 
could > >> specify a pdf() device parameter that says "choose font 
settings to > >> embed all fonts" (i.e., do not use fonts that cannot 
be embedded, >> > either). Something that guarantees me that I get a 
figure that I can >> > give to someone that is fully specified. Right 
now, accomplishing >> > this is not easy to figure out, and perhaps not 
even possible. Yes, >> > in the list of font families that R recognizes 
are some fonts that do >> > not seem among the 13 standard fonts (such 
as URWbookman). moreover, >> > if I choose it as my pdf font family, it 
is smart enough to use a >> > different symbol file ('StandardSymL'), 
which I hope is also open and >> > not adobe. If so, they could be used 
in principle. How do I get R to >> > embed URWbookman? ZapfDingbats 
always seems to be included, so I hope >> > this is open and 
embeddable.
 > >>
 > >> more help would be highly appreciated.
 > >>
 > >> Regards,
 > >>
 > >> /iaw
 > >> ---
 > >> ivo welch
 > >>
 > >> -----Original Message-----
 > >> From: Prof Brian Ripley <ripley at stats.ox.ac.uk>
 > >> To: ivo_welch-rstat8303 at mailblocks.com
 > >> Cc: r-help at stat.math.ethz.ch
 > >> Sent: Mon, 22 Aug 2005 17:07:14 +0100 (BST)
 > >> Subject: Re: [R] pdf font embedding --- again
 > >>
 > >> On Mon, 22 Aug 2005 ivo_welch-rstat8303 at mailblocks.com wrote:
 > >>
 > >> >
  > >> > dear R wizards--- I would like to do some book-on-demand 
printing
 > >>> at a
 >>
  > >> > popular printer named lulu, but lulu requires inclusion even of 
the
  > >> > basic postscript fonts. Interestingly, my book itself does not 
need
  > >> > the 14 base acrobat fonts, only the embedded R figures do. Of 
course,
  > >> > I really would like to get pdftex to embed the fonts, but how 
to do
  > >> > this is not obvious either. [This method seems to be what the R 
help
  > >> > page is indicating... The software including the PostScript 
plot file
  > >> > should either embed the font outlines (usually from '.pfb' or 
'.pfa'
  > >> > files) or use DSC comments to instruct the print spooler to do 
so.)
 > >>
  > >> Why not use the fonts your book does use in the figures? (That's 
how
 > >> my books are done.)
 > >>
  > >> > So, I would really, really like to embed the necessary fonts 
with
 > >>> the R
 >>
  > >> > figures. I first reread the discussion in this mailing list 
about
  > >> > (eps) font embedding earlier this year. This was ultimately not 
very
  > >> > helpful. First, I do not know how to instruct my embedding 
program to
  > >> > include the fonts that R figures want. Second, I already start 
with
  > >> > the pdf device, so distilling eps files is not a good 
option--and it
 > >> > would seem a bit crazy to first use the wrong output device
  > >> > (postscript), then ship my files over to a windows machine 
somewhere
  > >> > that has distiller installed, run distiller by hand, then ftp 
them > >> back
 > >> > to my linux machine---just for getting the fonts embedded.
 > >> >
  > >> > Is it impossible to get R to embed the necessary fonts in its 
pdf
 > >> > output?
 > >>
  > >> Yes, as it has no access to them. They are not Open Source. You 
may
  > >>> be able to use URW clones, depending on their licensing 
conditions.
 >>
 > >>
 > >> -- Brian D. Ripley, ripley at stats.ox.ac.uk
  > >> Professor of Applied Statistics, 
http://www.stats.ox.ac.uk/~ripley/
 > >> University of Oxford, Tel: +44 1865 272861 (self)
 > >> 1 South Parks Road, +44 1865 272866 (PA)
 > >> Oxford OX1 3TG, UK Fax: +44 1865 272595
 > >>
 > >> ______________________________________________
 > >> R-help at stat.math.ethz.ch mailing list
 > >> https://stat.ethz.ch/mailman/listinfo/r-help
  > >> PLEASE do read the posting guide! >> > 
http://www.R-project.org/posting-guide.html
 > > > >
 > -- Dr Paul Murrell
 > Department of Statistics
 > The University of Auckland
 > Private Bag 92019
 > Auckland
 > New Zealand
 > 64 9 3737599 x85392
 > paul at stat.auckland.ac.nz
 > http://www.stat.auckland.ac.nz/~paul/
 > >
 -- Dr Paul Murrell
 Department of Statistics
 The University of Auckland
 Private Bag 92019
 Auckland
 New Zealand
 64 9 3737599 x85392
 paul at stat.auckland.ac.nz
 http://www.stat.auckland.ac.nz/~paul/




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