[R] Odd timing behaviour in reading a file
Prof Brian Ripley
ripley at stats.ox.ac.uk
Sun Aug 7 07:20:04 CEST 2005
On Sun, 7 Aug 2005 Glenn.Stone at csiro.au wrote:
> Thanks, very helpful.
>
> Is there some way to adjust those GC triggers in advance?
Almost: that is what the statrtup flags such as --min-vsize help do.
> -----Original Message-----
> From: Prof Brian Ripley [mailto:ripley at stats.ox.ac.uk]
> Sent: Thu 8/4/2005 4:15 PM
> To: Stone, Glenn (CMIS, North Ryde)
> Cc: r-help at stat.math.ethz.ch
> Subject: Re: [R] Odd timing behaviour in reading a file
> Please see the gcFirst argument to system.time, which you should set to
> TRUE for such timings. Your second run is paying to GC the results of the
> first, most likely.
>
> Beyond that, R adjusts its GC triggers based on usage, and when you first
> start using large objects the trigger levels will grow and generally
> things will speed up. Set gcinfo(TRUE) to watch what is happening.
[...]
--
Brian D. Ripley, ripley at stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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