[R] slow loops in Monte Carlo Simulations
Witold Eryk Wolski
wolski at molgen.mpg.de
Tue Sep 28 15:09:37 CEST 2004
Hi!
Have you taken a look at the MCMCpack - package on cran:
"This package contains functions for posterior simulation for a number
of statistical models. All simulation is done in compiled C++ written in
the Scythe Statistical Library Version 1.0. All models return coda mcmc
objects that can then be summarized using the coda package."
/E
Nael Al Anaswah wrote:
>Hi there,
>
>I am running Monte Carlo Simulations in R using ordinary "while
>(condition)" loops. Since the number of iterations is something like
>100.000 and within each iteration a given subsample is extended
>sequentially it takes hours to run the simulation.
>
>Does anyone know if there is either a way to avoid using loops in
>Monte Carlo Simulations or how to include possible faster "c++"
>commands in R code?
>
>many thanks in advance.
>
>Nael Al-Anaswah
>
>
>
>-----------------------------------------------------
>Nael Al-Anaswah
>Department of Econometrics
>University of Muenster
>Germany
>
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>R-help at stat.math.ethz.ch mailing list
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>
>
>
--
Dipl. bio-chem. Witold Eryk Wolski
MPI-Moleculare Genetic
Ihnestrasse 63-73 14195 Berlin _
tel: 0049-30-83875219 'v'
http://www.molgen.mpg.de/~wolski / \
mail: witek96 at users.sourceforge.net ---W-W----
wolski at molgen.mpg.de
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