[R] install failure Ruuid package on OS X

Ingmar Visser i.visser at uva.nl
Mon Oct 11 17:45:20 CEST 2004


Dear All,

When installing the Ruuid package (from Bioconductor) from sources on my
MAC (OS X 10.3.5, R version 2.0.0) I get the following errors:

m00245:~ ivisser$ R CMD INSTALL  -l /Users/ivisser/Library/R/library/
/Users/ivisser/Desktop/Ruuid
* Installing *source* package 'Ruuid' ...
loading cache ./config.cache
checking for glib-config... no
checking how to run the C preprocessor... (cached) cc -E
checking for /usr/include/unistd.h... (cached) yes
creating ./config.status
creating src/Makevars
** libs
gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include
-I/usr/local/include/glib12 -DHAVE_UNISTD_H=1 -I/sw/include
-I/usr/local/include   -fno-common  -g -O2 -c Rinit.c -o Rinit.o
In file included from Ruuid.h:5,
                 from Rinit.c:1:
uuidP.h:24:18: glib.h: No such file or directory
In file included from Ruuid.h:5,
                 from Rinit.c:1:
uuidP.h:36: error: parse error before "guint32"
uuidP.h:36: warning: no semicolon at end of struct or union
uuidP.h:37: warning: data definition has no type or storage class
uuidP.h:38: error: parse error before "time_hi_and_version"
uuidP.h:38: warning: data definition has no type or storage class
uuidP.h:39: error: parse error before "clock_seq"
uuidP.h:39: warning: data definition has no type or storage class
uuidP.h:40: error: parse error before "node"
uuidP.h:40: warning: data definition has no type or storage class
uuidP.h:41: error: parse error before '}' token
make: *** [Rinit.o] Error 1
ERROR: compilation failed for package 'Ruuid'
** Removing '/Users/ivisser/Library/R/library/Ruuid'
** Restoring previous '/Users/ivisser/Library/R/library/Ruuid'
m00245:~ ivisser$ 


Any help is appreciated,

best, ingmar




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