[R] read.delim problem with trailing spaces
Michael Friendly
friendly at yorku.ca
Wed Oct 6 15:18:10 CEST 2004
I'm trying to read a comma delimited dataset that uses '.' for NA. I
found that if the last field on a line was a missing '.'
it was not read as NA, but just a '.', and the life variable was made a
factor. The data looks like this,
income,imr,region,oilexprt,imr80,gnp80,life
Afghanistan,75,400.0,4,0,185.0,.,37.5
Algeria,400,86.3,2,1,20.5,1920,50.7
Argentina,1191,59.6,1,0,40.8,2390,67.1
Australia,3426,26.7,4,0,12.5,9820,71.0
Austria,3350,23.7,3,0,14.8,10230,70.4
Bangladesh,100,124.3,4,0,139.0,120,.
Belgium,3346,17.0,3,0,11.2,12180,70.6
Benin,81,109.6,2,0,109.6,300,.
Bolivia,200,60.4,1,0,77.3,570,49.7
Brazil,425,170.0,1,0,84.0,2020,60.7
Britain,2503,17.5,3,0,12.6,7920,72.0
Burma,73,200.0,4,0,195.0,180,42.3
...
and I used
> nations <-
read.delim("~/sasuser/data/nations2.dat",na.strings=".",row.name=1,sep=",",header=TRUE)
> nations[1:10,]
income imr region oilexprt imr80 gnp80 life
Afghanistan 75 400.0 4 0 185.0 NA 37.5
Algeria 400 86.3 2 1 20.5 1920 50.7
Argentina 1191 59.6 1 0 40.8 2390 67.1
Australia 3426 26.7 4 0 12.5 9820 71.0
Austria 3350 23.7 3 0 14.8 10230 70.4
Bangladesh 100 124.3 4 0 139.0 120 .
Belgium 3346 17.0 3 0 11.2 12180 70.6
Benin 81 109.6 2 0 109.6 300 .
Bolivia 200 60.4 1 0 77.3 570 49.7
Brazil 425 170.0 1 0 84.0 2020 60.7
> summary(nations$life)
. 27.0 31.6 32.0 32.6 34.5 35.0 36.0 36.7 36.9 37.1 37.2 37.5 38.5 38.8 40.5
2 1 1 1 1 1 2 1 1 1 1 1 1 3 1 1
40.6 41.0 41.2 42.3 43.5 43.7 44.9 45.1 46.8 47.5 47.6 49.0 49.7 49.9 50.0 50.5
1 6 1 4 1 1 1 1 1 3 1 3 1 1 2 1
After much hair-pulling, I discovered that the data lines for Bangladesh and Benin contained a trailing space after the '.'. Removing those made the problem go away, but that shouldn't happen and I wonder if this is
still a potential problem for others. I'm using R 1.8.1.
-Michael
--
Michael Friendly Email: friendly at yorku.ca
Professor, Psychology Dept.
York University Voice: 416 736-5115 x66249 Fax: 416 736-5814
4700 Keele Street http://www.math.yorku.ca/SCS/friendly.html
Toronto, ONT M3J 1P3 CANADA
More information about the R-help
mailing list