[R] Help with Affymetrix data
kvyas at utk.edu
Mon Oct 4 22:48:12 CEST 2004
I have CEL files from Affymetrix Mouse Array 430_2 and am trying to get the
the individual PM intensities (11 per gene) for each sample. I would like to
write out this into a tab delimited text file. Where am I stalling? This is
what I've done:
Change dir(to where CEL files are saved)
Data <- ReadAffy()
eset <- rma(Data)
With this I am only able to get the average intensities per gene not the
intensity per probe of each gene.
Please help me out.
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