[R] problem with anova and glmmPQL
Andrew R. Criswell
andrew.c at bu.ac.th
Wed Nov 24 10:50:23 CET 2004
Hello:
I am getting an error message when appplying anova() to two equations
estimated using glmmPQL. I did look through the archives but didn't
finding anything relevant to my problem. The R-code and results follow.
Hope someone can help.
ANDREW
____________________________
> fm1 <- glmmPQL(choice ~ day + stereotypy,
+ random = ~ 1 | bear, data = learning, family = binomial)
iteration 1
iteration 2
iteration 3
iteration 4
> fm2 <- glmmPQL(choice ~ day + envir + stereotypy,
+ random = ~ 1 | bear, data = learning, family = binomial)
iteration 1
iteration 2
iteration 3
iteration 4
> anova(fm1)
numDF denDF F-value p-value
(Intercept) 1 2032 7.95709 0.0048
day 1 2032 213.98391 <.0001
stereotypy 1 2032 0.42810 0.5130
>
> anova(fm2)
numDF denDF F-value p-value
(Intercept) 1 2031 5.70343 0.0170
day 1 2031 213.21673 <.0001
envir 1 2031 12.50388 0.0004
stereotypy 1 2031 0.27256 0.6017
>
> anova(fm1, fm2)
Error in anova.lme(fm1, fm2) : Objects must inherit from classes "gls",
"gnls" "lm","lmList", "lme","nlme","nlsList", or "nls"
>
> version
_
platform i586-mandrake-linux-gnu
arch i586
os linux-gnu
system i586, linux-gnu
status
major 2
minor 0.0
year 2004
month 10
day 04
language R
--
Andrew R. Criswell, Ph.D.
Graduate School, Bangkok University
mailto:andrew.c at bu.ac.th
mailto:andrew at arcriswell.com
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