[R] Error in using coxph()
Siew Leng TENG
siewlengteng at yahoo.com
Sun May 16 10:07:20 CEST 2004
Hi,
I am getting errors of the following kind. I can't
seem to point the source of the error. I would greatly
appreciate any advice.
Many thanks and good day,
-Melinda
Error message :
----------------
"Ran out of iterations and did not converge in:
fitter(X, Y, strats, offset, init, control, weights =
weights,..."
Details :
---------
E is a vector of survival times (or censored times),
1-F is a vector of '0's, and cov is a matrix of 1
column. There are altogether 75 observations.
Tried :
------
P <- try(surv.cox <- coxph(Surv(E, 1-F) ~ cov,
coxph.control(iter.max=1e10, eps = 1e-03)))
Output (from above command) :
-----------------------------
Call:
coxph(formula = Surv(E, F) ~ cov, data =
coxph.control(iter.max = 1e+10,
eps = 0.001))
coef exp(coef) se(coef) z p
cov -0.233 0.793 0.11 -2.11 0.035
Likelihood ratio test=4.51 on 1 df, p=0.0336 n= 75
Machine Specs :
----------------
Unix/ Windows XP
R-1.8.1
Survival package
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