[R] be careful: using attach in R functions

Roger D. Peng rpeng at jhsph.edu
Tue Feb 24 22:20:42 CET 2004


Using attach() in this context may not be wise.  I tend to only use 
attach() when working interactively.  It might be better to use with() 
in this situation, such as

f <- function() {
	theta <- list(one=2.0, two=0.3, three=0.4)
	x <- with(theta, c(one, two, three))
	sample(x, 1)
}

-roger

li dongfeng wrote:
> Hi there,
> 
>   I have just found that the ``attach'' function
> can get you into trouble when called many times.
> For example, you have a simulation routine called ``f()'',
> in which you used ``attach'' and no corresponding ``detach''.
> Then you call this function many times. You will find that
> the system performance get slower and slower,
> because you are making the R search path longer and longer.
> So be careful when you use attach in a function!
> 
>   Below is a demonstration of this performance loss,
> you will see a linear growth in CPU time usage.
> Adding a ``detach()'' call at the end of ``f''
> will get rid of this problem.
> 
> ###############################
> f <- function(){
>   theta <- list(one=2.0, two=0.3, three=0.4)
>   attach(theta)
>   x  <- c(one, two, three)
>   sample(x, 1)
> }
> 
> test <- function(n=400){
>   timeu <- numeric(n)
>   for(i in seq(n)){
>     timeu[i] <-
>       system.time({
>         resi <- f()
>       })[3]
>   }
>   plot(timeu)
> }
> test()
> ##############################
> 
> 
> ããããããããLi Dongfeng
> ããããããããldf-nospacm at math.pku.edu.cn
> ãããããããããã2004-02-24
> 
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