[R] Binary logistic model using lrm function
Liaw, Andy
andy_liaw at merck.com
Tue Feb 17 01:08:18 CET 2004
You need to (re-)read the help page for predict.lrm, especially the `type'
argument.
Andy
> From: Nisa Bakkalbasi
>
> Hello all,
>
> Could someone tell me what I am doing wrong here?
>
> I am trying to fit a binary logistic model using the lrm
> function in Design.
> The dataset I am using has a dichotomous response variable, 'covered'
> (1-yes, 0-no) with explanatory variables, 'nepall', 'title',
> 'abstract',
> 'series', and 'author1.'
>
> I am running the following script and all seems to be working.
>
> library(Hmisc, T)
> library(Design, T)
> Mydata <- read.table("author1.df", header=T)
> attach(Mydata)
> dd <- datadist(nepall, title, abstract, series, author1)
> fit <- lrm(covered ~ nepall + title + abstract + series +
> author1, data = Mydata, x = TRUE, y = TRUE)
> anova(fit)
> detach()
>
> However, when I look at the output for predict(fit), I am
> getting values
> below 0 and above 1, which does not make much sense. Can
> someone lead me in
> the right direction?
>
> Thank you for your help in advance.
>
> Nisa Bakkalbasi
>
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