[R] Calling R from a non-X shell script to plot?
Liaw, Andy
andy_liaw at merck.com
Mon Dec 13 18:57:47 CET 2004
See
http://cran.us.r-project.org/doc/FAQ/R-FAQ.html#How-do-I-produce-PNG-graphic
s-in-batch-mode_003f
Andy
> From: doktora v
>
> I am trying to run R from an apache C++ module in a shell script to
> plot some data to display it in apache later. I get the error
> (reported in apache's logs):
>
> Xlib: connection to ":0.0" refused by server
> Xlib: No protocol specified
> Error in X11(paste("png::", filename, sep = ""), width,
> height, pointsize, :
> unable to start device PNG
> In addition: Warning message:
> unable to open connection to X11 display`'
> Execution halted
>
> Is anyone familiar with this (i.e. running R from a non-X
> environment)? Is there a way to get around this? I've seen some stuff
> about virtual devices, but have no idea if it works or where to
> start. If there is a simpler solution, please let me know.
>
> -- doktora
>
>
> I run the following shell script from the apache module using execve:
> ------------------------------------------------------
> DISPLAY=:0.0
> export DISPLAY
>
> if $R --vanilla --quiet < $rfile >$log ; then
> echo "Success"
> else
> echo "There were errors in $0, see $log"
> fi
> ------------------------------------------------------
>
> And $rfile contains this:
> ------------------------------------------------------
> png(filename = "/tmp/plot.png", width = 510, height = 360);
> plot(<some graph>)
> dev.off()
>
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