[R] reading a "sparse" matrix into R
Aaron J. Mackey
amackey at pcbi.upenn.edu
Tue Apr 27 23:10:09 CEST 2004
I have a 47k x 47k adjacency matrix that is very sparse (at most 30
entries per row); my textual representation therefore is simply an
adjacency list of connections between nodes for each row, e.g.
node connections
A B C D E
B A C D
C A E
D A
E A F
F E
G
H
I'd like to import this into a dataframe of node/connection
(character/vector-of-characters) pairs. I've experimented with scan,
but haven't been able to coax it to work. I can also "hack" it with
strsplit() myself, but I thought there might be a more elegant way.
Thanks,
-Aaron
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