[R] Problems with crossprod
Prof Brian Ripley
ripley at stats.ox.ac.uk
Fri Oct 17 16:20:59 CEST 2003
On Fri, 17 Oct 2003, Liaw, Andy wrote:
> Somehow R creates `a' as a matrix with 0 rows and 5 columns. I don't know
> how crossprod() or other linear algebra functions deals with such a
> degenerate matrix.
>
> I'd suggest R Core to add checks for strictly positive dimensions in such
> functions.
Rather, we do try to ensure they give the right answers for 0 extents.
The code has lines like
if (nrx > 0 && ncx > 0 && nry > 0 && ncy > 0) {
F77_CALL(dgemm)(transa, transb, &ncx, &ncy, &nrx, &one,
x, &nrx, y, &nry, &zero, z, &ncx);
}
and so does nothing for 0 extents! The corresponding matprod code does,
so this seems a simple oversight that will be fixed shortly.
> (Also, I find it strange that A[1,] is a vector, but A[numeric(0),] is a 0x5
> matrix...)
That's the point of drop = TRUE (the default): it drops extents of length
1 (and not 0).
>
> Andy
>
> > From: Giovanni Marchetti [mailto:gmm at ds.unifi.it]
> >
> > Dear R-users,
> >
> > I found a strange problem
> > working with products of two matrices, say:
> >
> > a <- A[i, ] ; crossprod(a)
> >
> > where i is a set of integers selecting rows. When i is empty
> > the result is in a sense random.
> >
> > After some trials the right answer
> > (a matrix of zeros) appears.
> >
> > --------------- Illustration --------------------
> > R : Copyright 2003, The R Development Core Team
> > Version 1.8.0 (2003-10-08)
> >
> > > A <-matrix(0, 5, 5)
> > > i <- c()
> > > a <- A[i, ] ; crossprod(a)
> > [,1] [,2] [,3] [,4] [,5]
> > [1,] 6.578187e-313 NaN NaN NaN NaN
> > [2,] NaN 1.273197e-313 NaN 1.485397e-313 NaN
> > [3,] NaN 4.243992e-313 2.121996e-314 NaN NaN
> > [4,] NaN 1.697597e-313 NaN 4.880590e-313 NaN
> > [5,] 5.941588e-313 NaN NaN 1.697597e-313 NaN
> > > a <- A[i, ] ; crossprod(a)
> > [,1] [,2] [,3] [,4]
> > [,5]
> > [1,] 2.121996e-314 5.729389e-313 NaN NaN
> > NaN
> > [2,] NaN NaN NaN NaN
> > 1.909796e-313
> > [3,] 2.970794e-313 NaN NaN NaN
> > NaN
> > [4,] NaN NaN NaN 8.487983e-314
> > NaN
> > [5,] NaN 6.365987e-313 2.546395e-313 NaN
> > NaN
> > > a <- A[i, ] ; crossprod(a)
> > [,1] [,2] [,3] [,4] [,5]
> > [1,] NaN 1.485397e-313 NaN NaN 2.970794e-313
> > [2,] 3.182994e-313 NaN NaN 1.060998e-313 NaN
> > [3,] NaN NaN NaN 1.697597e-313 2.737375e-312
> > [4,] NaN NaN NaN NaN 2.048394e+10
> > [5,] NaN NaN NaN NaN 2.970794e-313
> > > a <- A[i, ] ; crossprod(a)
> > [,1] [,2] [,3] [,4] [,5]
> > [1,] 1.591383e-266 20489834629 0 0 0
> > [2,] 5.031994e-266 0 0 0 0
> > [3,] 1.591205e-266 0 0 0 0
> > [4,] 1.264128e-267 0 0 0 0
> > [5,] 1.037656e-311 0 0 0 0
> > > a <- A[i, ] ; crossprod(a)
> > [,1] [,2] [,3] [,4] [,5]
> > [1,] 0 0 0 0 0
> > [2,] 0 0 0 0 0
> > [3,] 0 0 0 0 0
> > [4,] 0 0 0 0 0
> > [5,] 0 0 0 0 0
> > --------------- End of illustration------------
> >
> > The same problem does not appear using the matrix product:
> >
> > > a <- A[i, ] ; t(a) %*% a
> > [,1] [,2] [,3] [,4] [,5]
> > [1,] 0 0 0 0 0
> > [2,] 0 0 0 0 0
> > [3,] 0 0 0 0 0
> > [4,] 0 0 0 0 0
> > [5,] 0 0 0 0 0
> >
> > Note that Splus 6 returns an error message:
> >
> > > a <- A[i, ] ; crossprod(a)
> >
> > Problem in .Fortran.ok.Internal(if(cmplx) "zcrossp1"..:
> > subroutine dcrossp1:
> > Argument 1 has zero length
> >
> >
> > Thank you,
> >
> > Giovanni
> >
> > ______________________________________________
> > R-help at stat.math.ethz.ch mailing list
> > https://www.stat.math.ethz.ch/mailman/listinfo> /r-help
> >
>
> ______________________________________________
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>
>
--
Brian D. Ripley, ripley at stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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