[R] biplot and prcomp
Hector L. Ayala
ayalahec at msu.edu
Fri May 9 14:27:45 CEST 2003
R users
As was mentioned before, the princomp() function in R 1.7.0 will
complain if the data set has more columns than rows. The alternative
functions to generate a PCA analysis that will not complain about such type
of data set are prcomp() or pca() (multiv library). Although the results
of both of them are almost identical, the outputs are not compatible with
the biplot() function from mva. Does anybody know if there is an
alternative way to generate the biplot?? I can generate a two dimensional
graph with the sample scores by plotting the values from the object where
the results are, but how do I plot the arrows that represent the loadings???
thanks
Hector
********************************************
Héctor L. Ayala-del-Río, Ph.D.
Center for Microbial Ecology
Michigan State University
540 Plant & Soil Sciences Building
East Lansing, MI 48824
Tel: 517-353-9021
Fax: 517-353-2917
ayalahec at msu.edu
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