[R] multcomp and lme (followup)
Torsten Hothorn
Torsten.Hothorn at rzmail.uni-erlangen.de
Thu May 8 09:07:38 CEST 2003
I just realized that in the call to `csimint' the argument `asympt=TRUE'
is missing since we need to compute the confidence intervals for a glm
based on the normal approximation.
Torsten
---------------------------------------------------------------------
library(multcomp)
set.seed(290875)
# a factor at three levels
group <- factor(c(rep(1,10), rep(2, 10), rep(3,10)))
# Williams contrasts
contrasts(group) <- mginv(contrMat(table(group), type="Will"))
# a binary response
z <- factor(rbinom(30, 1, 0.5))
# estimate the model
gmod <- glm( z ~ group, family=binomial(link = "logit"))
# exclude the intercept
summary(csimtest(coef(gmod)[2:3], vcov(gmod)[2:3,2:3],
cmatrix=diag(2), df=27, asympt=TRUE))
> Thank you very much.
>
> Peter B.
_______________________________________________________________________
| |
| Dipl.-Stat. Torsten Hothorn |
| Institut fuer Medizininformatik, Biometrie und Epidemiologie |
| Waldstrasse 6, D-91054 Erlangen, Deutschland |
| Tel: ++49-9131-85-22707 (dienstl.) |
| Fax: ++49-9131-85-25740 |
| Email: Torsten.Hothorn at rzmail.uni-erlangen.de |
| Web: http://www.imbe.med.uni-erlangen.de/~hothorn |
|_______________________________________________________________________|
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