[R] Contents of R-help digest.-contouring
Spencer Graves
spencer.graves at pdf.com
Mon Jul 21 20:22:55 CEST 2003
Comments inline:
john lewis wrote:
> R- Users:
>
> Can someone indicate what I am during wrong? This is a script essentially from
> Venerable & Ripley's text on interpolating a surface with loess function but I can not get it to run.
>
> Thanks.
> John Lewis
> Professor
> McGill University
> Montreal
>
> library(MASS)
> library(modreg)
> data(topo)
> par(mfcol=c(2,2), pty="s")
> topo.loess <- loess(z ~ x * y, topo, degree=2, span = 0.25, normalize=F)
> topo.mar <- list(x = seq(0, 6.5, 0.1), y=seq(0, 6.5, 0.1))
> topo.lo <- predict(topo.loess, expand.grid(topo.mar), se=T)
> lo.1 <- as.data.frame(topo.lo)
> lo.2 <- as.matrix(lo.1$fit)
I just listed "lo.2": It was a 4356 x 1 matrix; in S-Plus 6.1, it
was a NULL matrix with 0 rows and 1 column. I recently attempted to
upgrade to R 1.7.1 and now I can't get graphics from R. However, the
following worked for me in S-Plus 6.1:
lo.2 <- matrix(topo.lo$fit, nrow=66)
With this, I got a plot that looked sensible (though I didn't compare it
with MASS).
hope this helps. spencer graves
>
> lo.3 <- as.matrix(lo.1$se.fit)
>
> contour(topo.mar$x,topo.mar$y,lo.2, levels = seq(700,1000,25),
>
> xlab="fit", ylab="")
>
> points(topo)
>
> contour(topo.mar$x,topo.mar$y,lo.3, levels = seq(5, 25, 5),
>
> xlab="standard error", ylab="")
>
> title("Loess degree = 2")
>
> points(topo)
>
>
> This is the error I keep getting.
>
> "Error in contour.default(topo.mar$x, topo.mar$y, lo.2, levels = seq(700, :
> no proper `z' matrix specified"
>
> I received this same message when I ran the script first without changing topo.lo
> from a list to data.frame etc. as seen below.
>
> contour(topo.mar$x,topo.mar$y,topo.lo$fit, levels = seq(700,1000,25),
>
> xlab="fit", ylab="")
>
>
> I checked the length of each variable and they are correct.
> [[alternative HTML version deleted]]
>
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