[R] randomForest crash?
Liaw, Andy
andy_liaw at merck.com
Mon Apr 21 14:18:13 CEST 2003
Hi Karen,
I have not seen such problem, nor heard similar report. All I can say is
that we have used the package on much larger data sets without problem.
As the R developers say, the best way to get bugs fixed is by crashing the
developer's machine. If you can send me the data (without column/row
labels, if need be), I can try and see if it crashes R on my machine. Other
than that, there's not much I can offer.
Cheers,
Andy
> -----Original Message-----
> From: Karen.Chancellor at asu.edu [mailto:Karen.Chancellor at asu.edu]
> Sent: Monday, April 21, 2003 2:57 AM
> To: r-help at stat.math.ethz.ch
> Subject: [R] randomForest crash?
>
>
> I am attempting to use randomForests to look for interesting genes in
> microarray data with 216genes, 2 classes and 52 samples. My
> data.frame
> is 52x217 with the last column, V217 being the class(1 or 2).
>
> When I try
> lung.rf <- randomForest(V217 ~ ., data=tlSA216cda, importance=
> TRUE, proximity = TRUE)
> the GUI crashes.
>
> I am running R-1.6.2 under windo$e98, and most recent version
> of randomForest.
> Your ideas appreciated.
> Karen
>
>
> .- --. ....- -.-. -.-.
>
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