[R] capturing the result of print in a variable?
Warnes, Gregory R
gregory_r_warnes at groton.pfizer.com
Tue Sep 10 23:05:54 CEST 2002
Here are two small functions that I've been using lately. They show how to
use textConnection to capture printed output:
texteval <- function( sourceText, collapse=NULL, echo=TRUE )
{
sourceConn <- textConnection(sourceText, open="r")
resultConn <- textConnection("resultText", open="w")
sink(resultConn)
tmp <- source(file=sourceConn, local=FALSE, echo=echo, print.eval=TRUE)
sink()
close(resultConn)
close(sourceConn)
return( paste(c(resultText, collapse), collapse=collapse) )
# the reason for c(result, collapse) is so that we get the line
# terminator on the last line of output. Otherwise, it just shows up
# between the lines.
}
printed <- function( sourceText, collapse=NULL )
{
return( texteval(sourceText, collapse, FALSE) )
}
For example:
> printed(" x <- rnorm(100); y <- rnorm(100); print(summary( lm( y ~ x )))"
)
[1] ""
[2] "Call:"
[3] "lm(formula = y ~ x)"
[4] ""
[5] "Residuals:"
[6] " Min 1Q Median 3Q Max "
[7] "-2.4206 -0.7519 0.1062 0.7153 2.3810 "
[8] ""
[9] "Coefficients:"
[10] " Estimate Std. Error t value Pr(>|t|)"
[11] "(Intercept) 0.09799 0.10745 0.912 0.364"
[12] "x -0.00171 0.11397 -0.015 0.988"
[13] ""
[14] "Residual standard error: 1.074 on 98 degrees of freedom"
[15] "Multiple R-Squared: 2.298e-06,\tAdjusted R-squared: -0.0102 "
[16] "F-statistic: 0.0002252 on 1 and 98 DF, p-value: 0.988 "
[17] ""
-Greg
> -----Original Message-----
> From: Thomas Lumley [mailto:tlumley at u.washington.edu]
> Sent: Tuesday, September 10, 2002 3:45 PM
> To: Michael A. Miller
> Cc: r-help at stat.math.ethz.ch
> Subject: Re: [R] capturing the result of print in a variable?
>
>
> On 10 Sep 2002, Michael A. Miller wrote:
>
> > I'd like to capture the results of a print() command so that I
> > can put the results in a tktext widget. I know I can redirect
> > the output to a file with sink. I'm looking for something like
> > that, but where I can redirect the output into a variable. Is
> > there a way to do that?
> >
> Look at textConnection
>
> -thomas
>
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