[R] Building R on Mac OS X-"dumping methods" problem
Michael Maibaum
mike at gene-hacker.net
Sat Oct 19 01:28:31 CEST 2002
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On Friday, October 18, 2002, at 03:52 PM, Jan de Leeuw wrote:
> Hm. That's basically what I use, and I don't have that problem
> (any more). Are you using the --enable-shlib flag when
> building R ?
yes, but I've tried it without as well....
Is this likely to be a problem with the compiler itself? WOuld it be
worth getting fink to build g77 and trying to build R with that g77
instead?
thanks
Michael
>
> On Friday, October 18, 2002, at 03:57 PM, Michael Maibaum wrote:
>
>> On Friday, October 18, 2002, at 03:28 PM, Jan de Leeuw wrote:
>>
>>> This was an error we had about half a year ago when building R on
>>> OS X. Which gcc ? Which R ? Which g77 ? Are you sure you are
>>> building from a clean install (not installed over a previous
>>> version) ?
>>
>>
>> R 1.6.0, clean install.
>>
>> standard gcc 3.1 from Apple with 10.2, g77 is
>>
>> %g77 -v
>> Reading specs from
>> /opt/local/lib/gcc-lib/powerpc-apple-darwin6.1/3.1/specs
>> Configured with: ../gcc3/configure --prefix=/opt/local -
>> --enable-languages=f77 --infodir=/opt/local/share/info
>> Thread model: single
>> Apple Computer, Inc. GCC version 1151, based on gcc version 3.1
>> 20020420 (prerelease)
>> (basically the fink one, but ported to darwinports)
>>>
>>> On Friday, October 18, 2002, at 12:16 PM, Michael Maibaum wrote:
>>>
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>>>>
>>>> I am trying to create a darwinports package for R, but I cannot get
>>>> R to compile on Mac OSX 10.2.
>>>>
>>>> I have install g77 which seems fine. R compiles without problems
>>>> until it reaches
>>>>
>>>>
>>>> dumping R code in package 'methods'
>>>> Error in .Call("R_initialize_methods_metadata", table, PACKAGE =
>>>> "methods") :
>>>> .Call function name not in load table
>>>> Execution halted
>>>> gnumake[4]: *** [../../../library/methods/R/all.rda] Error 1
>>>>
>>>>
>>>> my configure environment is
>>>> FFLAGS="-O3 -funroll-all-loops" LDFLAGS="-L/opt/local/lib/" \
>>>> CPPFLAGS="-I/opt/local/include/"
>>>>
>>>> configure.args --without-gnome --enable-R-shlib -
>>>> --mandir='/opt/local/share/man' \
>>>> --with-tcl-config=/System/Library/Tcl/8.3/tclConfig.sh \
>>>> -C --without-blas
>>>>
>>>> any suggestions? THis is essentially identical to the way fink
>>>> builds R so...?
>>>>
>>>> thanks
>>>>
>>>> Michael
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