[R] Building R on Mac OS X-"dumping methods" problem

Michael Maibaum mike at gene-hacker.net
Sat Oct 19 00:57:40 CEST 2002


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On Friday, October 18, 2002, at 03:28 PM, Jan de Leeuw wrote:

> This was an error we had about half a year ago when building R on
>  OS X. Which gcc ? Which R ? Which g77 ? Are you sure you are
> building from a clean install (not installed over a previous version) ?


R 1.6.0, clean install.

standard gcc 3.1 from Apple with 10.2, g77 is

%g77 -v
Reading specs from  
/opt/local/lib/gcc-lib/powerpc-apple-darwin6.1/3.1/specs
Configured with: ../gcc3/configure --prefix=/opt/local  
- --enable-languages=f77 --infodir=/opt/local/share/info
Thread model: single
Apple Computer, Inc. GCC version 1151, based on gcc version 3.1  
20020420 (prerelease)
(basically the fink one, but ported to darwinports)

thanks,

Michael
>
> --- Jan
>
> On Friday, October 18, 2002, at 12:16 PM, Michael Maibaum wrote:
>
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>>
>> I am trying to create a darwinports package for R, but I cannot get R  
>> to compile on Mac OSX 10.2.
>>
>> I have install g77 which seems fine. R compiles without problems  
>> until it reaches
>>
>>
>> dumping R code in package 'methods'
>> Error in .Call("R_initialize_methods_metadata", table, PACKAGE =  
>> "methods") :
>>         .Call function name not in load table
>> Execution halted
>> gnumake[4]: *** [../../../library/methods/R/all.rda] Error 1
>>
>>
>> my configure environment is
>> 	FFLAGS="-O3 -funroll-all-loops" LDFLAGS="-L/opt/local/lib/" \
>> 				CPPFLAGS="-I/opt/local/include/"
>>
>> configure.args	--without-gnome --enable-R-shlib -  
>> --mandir='/opt/local/share/man' \
>> 				--with-tcl-config=/System/Library/Tcl/8.3/tclConfig.sh \
>> 				-C --without-blas
>>
>> any suggestions? THis is essentially identical to the way fink builds  
>> R so...?
>>
>> thanks
>>
>> Michael
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> ===
> Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
> Editor: Journal of Multivariate Analysis, Journal of Statistical  
> Software
> US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554
> phone (310)-825-9550;  fax (310)-206-5658;  email:  
> deleeuw at stat.ucla.edu
> homepage: http://gifi.stat.ucla.edu
>   
> ----------------------------------------------------------------------- 
> --------------------------
>           No matter where you go, there you are. --- Buckaroo Banzai
>                    http://gifi.stat.ucla.edu/sounds/nomatter.au
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