[R] Installing R1.6.0 on SGI
Laurent Gautier
laurent at cbs.dtu.dk
Thu Oct 17 22:57:58 CEST 2002
On Thu, Oct 17, 2002 at 05:13:23PM +0100, Brandon Whitcher wrote:
>
> I am currently trying to install R 1.6.0 on an SGI Octane running:
>
> > uname -aR
>
> IRIX64 hcu091 6.5 6.5.9m 07201608 IP30
>
> and I am receiving a fatal error during the make step. Any help in this matter would be greatly appreciated.
>
> Here is the final output from "./configure"...
>
> ----------
>
> R is now configured for mips-sgi-irix6.5
>
> Source directory: .
>
> Installation directory: /usr/local
>
> C compiler: gcc -g -O2
>
> C++ compiler: g++ -g -O2
>
> Fortran compiler: g77 -g -O2
>
> X11 support: yes
>
> Gnome support: no
>
> Tcl/Tk support: yes
>
> Readline support: no
>
> R profiling support: yes
>
> R as a shared library: no
>
> Recommended packages: yes
>
> ----------
>
> A minor issue is that even though I have installed readline (although in
>
> a nonstandard directory), it is not supporting it.
>
> Here is the fatal error from "make"...
>
You can check what is going on with readline in configure.log I think.
You can also use the file config.site to specify odd places
(ex: CPPFLAGS="-I/usr/freeware/include -I/usr/local/include" )
> ----------
>
> building package 'methods'
>
> all.R is unchanged
>
> ../../../library/methods/man/methods.Rd is unchanged
>
> UX:make: INFO: `Makedeps' is up to date.
>
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
>
> do_substitute_direct.c -o do_substitute_direct.o
>
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
>
> methods_list_dispatch.c -o methods_list_dispatch.o
>
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
>
> method_meta_data.c -o method_meta_data.o
>
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
>
> slot.c -o slot.o
>
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
>
> class_support.c -o class_support.o
>
> gcc -shared -L/usr/local/lib -o methods.so do_substitute_direct.o
>
> methods_list_dispatch.o method_meta_data.o slot.o class_support.o
>
> dumping R code in package 'methods'
>
> Fatal error: The X11 shared library could not be loaded.
>
> The error was 216482:/var/R-1.6.0/bin/R.bin: rld: Fatal Error:
>
> unresolvable symbol in /var/R-1.6.0/modules/R_X11.so: png_set_IHDR
>
> *** Error code 2 (bu21)
>
> *** Error code 1 (bu21)
>
> *** Error code 1 (bu21)
>
> *** Error code 1 (bu21)
>
> *** Error code 1 (bu21)
>
I do not know about this particular one (neither I tried to install
1.6.0 on a SGI), sorry...
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