[R] check() warnings for survival-2.6

Thomas Hoffmann thoffman at zappa.sax.de
Mon Nov 12 22:58:05 CET 2001


I am not sure if this is the right place for that kind of questions, but
I wondered
that the recommended package survival did not pass R's check procedure
without
warnings:

1) unbalanced braces:
*   Rd files with unbalanced braces:
*     man/Surv.Rd
*     man/cluster.Rd
*     man/cox.zph.Rd
*     man/coxph.Rd
*     man/coxph.detail.Rd
*     man/date.ddmmmyy.Rd
*     man/lines.survfit.Rd
*     man/plot.cox.zph.Rd
*     man/predict.survreg.Rd
*     man/pyears.Rd
*     man/residuals.coxph.Rd
*     man/stanford2.Rd
*     man/strata.Rd
*     man/summary.survfit.Rd
*     man/survdiff.Rd
*     man/survexp.Rd
*     man/survfit.Rd
*     man/survreg.control.Rd
*     man/survsum.Rd
*     man/untangle.specials.Rd

2) missing docs:
* checking for undocumented objects ... WARNING
 [1] "[.Surv"                  "[.coxph.penalty"        
 [3] "[.ratetable"             "[.ratetable2"           
 [5] "[.survfit"               "[.tcut"                 
 [7] "[.terms"                 "anova.survreg"          
 [9] "anova.survreglist"       "as.character.Surv"      
[11] "as.data.frame.Surv"      "as.data.frame.difftime" 
[13] "as.matrix.ratetable"     "coxpenal.fit"           
[15] "format.Surv"             "is.category"            
[17] "is.na.Surv"              "is.na.coxph.penalty"    
[19] "is.na.ratetable"         "is.na.ratetable2"       
[21] "labels.survreg"          "match.ratetable"        
[23] "model.frame.coxph"       "model.frame.survreg"    
[25] "model.newframe"          "print.coxph.penal"      
[27] "print.ratetable"         "print.summary.survreg"  
[29] "print.survdiff"          "print.survexp"          
[31] "print.survreg.penal"     "residuals.survreg.penal"
[33] "summary.coxph.penal"     "summary.ratetable"      
[35] "survexp.cfit"            "survpenal.fit"          
[37] "survreg.fit"             "tcut"                   

3) non-matching docs:
* checking for code/documentation mismatches ... WARNING
$as.date
$as.date$code
[1] "x"     "order" "..."  
$as.date$docs
[1] "x"


If I did not miss something, these are bugs, but not of R, but of a
contributed
package. What is the right place for reporting such bugs?

Kind regards,
Thomas.

-- 
Thomas Hoffmann                                    Telephone:
49-351-4598831
thoffman at zappa.sax.de                                       Dresden,
Germany

..sig under construction ...

-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-
r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html
Send "info", "help", or "[un]subscribe"
(in the "body", not the subject !)  To: r-help-request at stat.math.ethz.ch
_._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._



More information about the R-help mailing list