[R] plotting dendrograms from cluster analyses
Friedrich Leisch
Friedrich.Leisch at ci.tuwien.ac.at
Tue Aug 28 14:57:16 CEST 2001
>>>>> On Tue, 28 Aug 2001 14:37:46 +0200,
>>>>> Philippe Grosjean (PG) wrote:
>> I started a more general approch for dendrograms a year ago using
>> class "dendrogram". If you coerce an hclust object to class dendrogram
>> using as.dendrogram() then you can use cut.dendrogram to do what you
>> want (it returns a list with the upper and lower parts of the cutted
>> tree).
> Yes, I have seen also some changes in the FAQ of, I think, R v. 1.2.3. I've
> written code last year for v. 1.1.1 and now I have to finish the library for
> the end of the year. I am a bit embarrassed with this. Should I move to
> 'dendrogram' objects or should I keep working on 'hclust' objects?
If you need code or results in the near future I'd stick with hclust
if I were you. dendrogram is currently more of an experiment for more
general trees than hclust allows (more than one child nodes etc.)
... I won't replace the existing hclust, rpart classes etc. but will
provide additional plotting, printing and cutting facilities.
> Moreover,
> my library has to be compatible with both R and Splus. Splus implementation
> of hclust is somewhat different but quite close. Do you implement
> 'dendrogram' objects for Splus too?
Hmm, I see no reasons why they should not work with Splus, currently
everything is written in S. If I move stuff to C for speedup things
might get different. But even then I'd probably try to be compatible.
> I have also the same problem with time management in time series, and with
> graphs ("classical" versus lattice)... R is moving so fast these time, as
> does Splus, but who will complain...!
:-)
.f
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