[R] NLME augPred error
Pedro J. Aphalo
pedro.aphalo at joensuu.fi
Wed Aug 8 15:52:34 CEST 2001
Could someone explain the meaming of this error message from augPred:
> augPred(area3.pen.nlme, primary=~day)
Error in predict.nlme(object, value[1:(nrow(value)/nL), , drop =
FALSE], :
Levels 1,2,3 not allowed for block
>
predict.nlme(area3.pen.nlme) does not produce an error.
area3.pen.nlme was created with:
> area3.pen.nlme <- nlme(area ~ SSlogis(day, Asym, xmid, scal),
+ data=area.pen.data,
+ fixed = Asym + xmid + scal ~ dose + block,
+ random = Asym + xmid + scal ~ 1|seedling,
+ weights = varPower(),
+ start = c(2887,0,0,0,10.7,0,0,0,2.29,0,0,0))
>
area, day and dose are numeric
block and seedling are factors
area is the area in mm2 of one growing leaf for each seedling.
with
fixed = Asym + xmid + scal ~ dose
or
fixed = Asym + xmid + scal ~ block
it works.
Thanks in advance for any help.
Pedro.
Windows 95
platform i386-pc-mingw32
arch x86
os Win32
system x86, Win32
status
major 1
minor 3.0
year 2001
month 06
day 22
language R
Package: nlme
Version: 3.1-15
Date: 2001/06/18
Built: R 1.3.0; Win32; 2001-06-20 13:32:23
and
Package: nlme
Version: 3.1-16
Date: 2001/06/20
Built: R 1.3.0; Win32; 2001-07-24 12:02:25
--
===============================================================
Pedro J. Aphalo
University of Joensuu
Faculty of Forestry
P.O. Box 111, FIN-80101 Joensuu, FINLAND
mailto:pedro.aphalo at joensuu.fi
http://cc.joensuu.fi/~aphalo/pedro.html
fax: +358 13 251 4444
tel: +358 13 251 4406 ,,,^..^,,,
================================================================
-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-
r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html
Send "info", "help", or "[un]subscribe"
(in the "body", not the subject !) To: r-help-request at stat.math.ethz.ch
_._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._
More information about the R-help
mailing list