exact test for large tables. Was: [R] unexpected R crash - again
Emmanuel Paradis
paradis at isem.univ-montp2.fr
Mon Aug 28 11:20:59 CEST 2000
At 13:51 26/08/00 +0100, Yudi Pawitan wrote:
>
>If you have an actual large table to analyse, rather
>than trying to solve the space problem, you may want
>to consider a MonteCarlo implementation
>of the exact test. Very easy to implement in R. See,
>for example, Lange's Numerical Analysis for Statisticians,
>Section 21.7.
>
>-Yudi-
Yes, but this does not seem to be a simple memory problem. I tested under
Solaris, and this works with fisher.test(T), and with fisher.test(T,
workspace=1e6) as well (with the default memory size). Under WinNT,
fisher.test(T, workspace=1e6) works fine. I did not suspect a memory
problem since the crash occurs only with _this_ sample but not with other
samples of similar size.
Emmanuel
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