[Rd] model.weights and model.offset: request for adjustment
Martin Maechler
m@ech|er @end|ng |rom @t@t@m@th@ethz@ch
Thu Feb 3 15:21:45 CET 2022
>>>>> tim taylor
>>>>> on Thu, 3 Feb 2022 11:30:17 +0000 (GMT) writes:
>> On 03/02/2022 11:14 Martin Maechler <maechler using stat.math.ethz.ch> wrote:
>>
>>
>> >>>>> Ben Bolker
>> >>>>> on Tue, 1 Feb 2022 21:21:46 -0500 writes:
>>
>> > The model.weights() and model.offset() functions from the 'stats'
>> > package index possibly-missing elements of a data frame via $, e.g.
>>
>> > x$"(offset)"
>> > x$"(weights)"
>>
>> > This returns NULL without comment when x is a data frame:
>>
>> > x <- data.frame(a=1)
>> > x$"(offset)" ## NULL
>> > x$"(weights)" ## NULL
>>
>> > However, when x is a tibble we get a warning as well:
>>
>> > x <- tibble::as_tibble(x)
>> > x$"(offset)"
>> > ## NULL
>> > ## Warning message:
>> > ## Unknown or uninitialised column: `(offset)`.
>>
>> > I know it's not R-core's responsibility to manage forward
>> > compatibility with tibbles, but in this case [[-indexing would seem to
>> > be better practice in any case.
>>
>> Yes, I would agree: we should use [[ instead of $ here
>> in order to force exact matching just as principle
>>
>> Importantly, because also mf[["(weights)"]]
>> will return NULL without a warning for a model/data frame, and
>> it seems it does so also for tibbles.
>>
>> > Might a patch be accepted ... ?
>>
>> That would not be necessary.
>>
>> There's one remaining problem however:
>> `$` access is clearly faster than `[[` for small data frames
>> (because `$` is a primitive function doing everything in C,
>> whereas `[[` calls the R level data frame method ).
>>
>> Faster in both cases, i.e., when there *is* a column and when there
>> is none (and NULL is returned), e.g., for the first case
>>
>> > system.time(for(i in 1:20000) df[["a"]])
>> user system elapsed
>> 0.064 0.000 0.065
>> > system.time(for(i in 1:20000) df$a)
>> user system elapsed
>> 0.009 0.000 0.009
>>
>> So that's probably been the reason why `$` has been prefered?
> Would .subset2(df, "a) be preferable?
R> df <- mtcars
R> system.time(for(i in 1:20000) df[["hp"]])
> user system elapsed
> 0.078 0.000 0.078
R> system.time(for(i in 1:20000) df$hp)
> user system elapsed
> 0.011 0.000 0.010
R> system.time(for(i in 1:20000) .subset2(df,"hp"))
> user system elapsed
> 0.004 0.000 0.004
> Tim
Yes, I think that's a very good idea --
notably, as interestingly it seems to work with tibble's very
well, too.
Martin
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