[Rd] readLines function with R >= 3.5.0
Michael Lawrence
l@wrence@mich@el @ending from gene@com
Wed Jun 13 14:24:07 CEST 2018
Are you sure it's not available in patched? It's definitely in the
source since 6/1.
Michael
On Wed, Jun 13, 2018 at 2:19 AM, Martin Maechler
<maechler using stat.math.ethz.ch> wrote:
>>>>>> Michael Lawrence
>>>>>> on Tue, 12 Jun 2018 19:27:49 -0700 writes:
>
> > Hi Jen, This was already resolved for R 3.5.1 by just
> > disabling buffering on terminal file connections like stdin.
>
> and before R 3.5.1 exists, *and*
> as the change is also not yet available in R patched (!)
> this means using a version of
> "R-devel", e.g. for Windows available from
> https://cloud.r-project.org/bin/windows/base/rdevel.html
>
> Martin
>
> > Sounds like you might want to be running a web service or
> > something instead though.
>
> > Michael
>
> > On Tue, Jun 12, 2018 at 4:46 PM, Jennifer Lyon
> > <jennifer.s.lyon using gmail.com> wrote:
> >> Hi:
> >>
> >> I have also just stumbled into this bug. Unfortunately, I
> >> can not change the data my program receives from
> >> stdin. My code runs in a larger system and stdin is sent
> >> to a Docker container running my R code. The protocol is
> >> I read a line, readLines("stdin", n=1), do some actions,
> >> send output on stdout, and wait for the next set of data.
> >> I don't have control over this protocol, so I can't use
> >> the ^D workaround.
> >>
> >> I am open for other workaround suggestions. The single
> >> line is actually JSON and can be quite large. If there
> >> isn't something else cleaner, I am going to try
> >> readChar() in a while loop looking for \n but I'm
> >> guessing that would likely be too slow. I am open to
> >> other workaround solutions. For the moment I have
> >> reverted back to R 3.4.4.
> >>
> >> Thanks for any suggestions.
> >>
> >> Jen.
> >>
> >>
> >>>> >>>>> Martin Maechler >>>>> on Mon, 28 May 2018
> >>>> 10:28:01 +0200 writes:
> >>>>
> >>>> >>>>> Ralf Stubner >>>>> on Fri, 25 May 2018 19:18:58
> >>>> +0200 writes:
> >>>>
> >>>> >> Dear all, I would like to draw you attention to this
> >>>> >> question on SO:
> >>>> >>
> >> https://stackoverflow.com/questions/50372043/readlines-function-with-new-version-of-r
> >>>>
> >>>>
> >>>> >> Based on the OP's code I used the script
> >>>>
> >>>> >> #######################################
> >>>> >> create_matrix <- function() { >> cat("Write the
> >>>> numbers of vertices: ") >> user_input <-
> >>>> readLines("stdin", n=1) >> user_input <-
> >>>> as.numeric(user_input) >> print(user_input) >> } >>
> >>>> create_matrix()
> >>>> >> #######################################
> >>>>
> >>>> >> and called it with "R -f <filename>" from the
> >>>> command line.
> >>>>
> >>>> >> With 'R version 3.4.4 (2018-03-15) -- "Someone to
> >>>> Lean On"' the
> >> script
> >>>> >> prints the inputed number as expected. With both 'R
> >>>> version 3.5.0 >> (2018-04-23) -- "Joy in Playing"' and
> >>>> 'R Under development
> >> (unstable)
> >>>> >> (2018-05-19 r74746) -- "Unsuffered Consequences"'
> >>>> the script does
> >> not
> >>>> >> continue after inputing a number.
> >>>>
> >>>> > I can confirm. > It "works" if you additionally (the
> >>>> [Enter], i.e., EOL) you also > "send" an EOF -- in Unix
> >>>> alikes via <Ctrl>-D
> >>>>
> >>>> > The same happens if you use 'Rscript <filename>'
> >>>>
> >>>> > I'm not the expert here, but am close to sure that we
> >>>> (R core) > did not intend this change, when fixing
> >>>> other somewhat subtle > bugs in Rscript / 'R -f'
> >>>>
> >>>> > Martin Maechler
> >>>>
> >>>> The same behavior in regular R , no need for a script
> >>>> etc.
> >>>>
> >>>> > str(readLines("stdin", n=1))
> >>>>
> >>>> then in addition to the input you need to "give" an EOF
> >>>> (Ctrl D) in R
> >>> = 3.5.0
> >>>>
> >>>> Interestingly, everything works fine if you use stdin()
> >>>> instead of "stdin" :
> >>>>
> >>>> > rr <- readLines(stdin(), n=1) foo > rr [1] "foo"
> >>>> >
> >>>> ----------
> >>>>
> >>>> So, for now use stdin() which is much clearer than the
> >>>> string "stdin" anyway
> >>>>
> >>>> Martin Maechler
> >>
> >> [[alternative HTML version deleted]]
> >>
> >> ______________________________________________
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>
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