[Rd] Problem with R_registerRoutines
Martin Maechler
maechler at stat.math.ethz.ch
Fri Feb 23 18:56:41 CET 2018
>>>>> <Jon.SKOIEN at ec.europa.eu>
>>>>> on Fri, 23 Feb 2018 15:43:43 +0000 writes:
> Thanks a lot for your answer Jeroen!
> I should have mentioned that I had actually only checked with the win-builder, as I did not have R-devel installed on my computer.
> But based on your answer I installed R-devel locally on a Linux-server (Redhat), and the package could be checked without the NOTE. So you might be right that this is a windows issue. However, another package that I am maintaining does not get any notes from the check on the win-builder (including fortran-code), so there is still something I don't understand here.
> Anyway, does this mean that the package might be accepted on CRAN without further changes?
at least not automatically, and not very probably in my gut
feeling... but I may be wrong.
Did you use R CMD check --as-cran <your_pkg>
on Linux ?
Martin
> Thanks,
> Jon
> ________________________________________
> From: Jeroen Ooms [jeroenooms at gmail.com]
> Sent: 23 February 2018 13:36
> To: SKOIEN Jon (JRC-ISPRA)
> Cc: r-devel
> Subject: Re: [Rd] Problem with R_registerRoutines
> On Windows this warning may be a false positive if R cannot find
> "objdump.exe" which is required for this check. I think this is
> actually a bug in R because it should be looking for "objdump.exe"
> inside BINPREF (where gcc is) rather than on the PATH.
> Can you check if you get the same warning if you upload the package to
> https://win-builder.r-project.org ?
> On Fri, Feb 23, 2018 at 10:28 AM, <Jon.SKOIEN at ec.europa.eu> wrote:
>> Dear list,
>>
>> I am trying to update a package to pass the CRAN-checks.
>> But I am struggling with the following note:
>>
>> File 'psgp/libs/i386/psgp.dll':
>> Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols'
>> File 'psgp/libs/x64/psgp.dll':
>> Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols'
>>
>> It is good practice to register native routines and to disable symbol
>> search.
>>
>>
>> I did already run:
>> tools::package_native_routine_registration_skeleton(".")
>> This gave me some code, including a function R_init_psgp, which includes calls to the functions above, and also the names of the C++ functions to be called from R.
>> I first saved this code in registerDynamicSymbol.c and added .registration = TRUE to useDynLib in the NAMESPACE file.
>> I still get the error above. As I saw that the file has different names in other packages, I have also tried to save it psgp_init.c, and in init.cpp, still with the same error message.
>>
>> I have read the relevant part of the R extensions manual, but could not find anything that could help me with this problem.
>> I have had a look at the similar files in other packages (including one of my own, which works), and the initialization seems fine to me.
>> There is surely something I have overlooked, is anyone able to give me a hint to where I might look? The code is in C++, not sure if that could have anything to do with the problem?
>>
>> Thanks,
>> Jon
>>
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