[Rd] Building R under Linux - library dependencies

Paweł Piątkowski cosi1 at tlen.pl
Wed Sep 7 20:50:25 CEST 2016


> | Is there a way to overcome this problem? Precompiled versions of R can be installed on various system configurations, so I guess that there should be a way to compile it in a version-agnostic manner.
> 
> Yes, for example by
> 
>   -- using a Docker container which is portable across OSs (!!) and versions

Docker R containers are north of 250 MB. I have checked experimentally that you can trim R down to 16 MB (!) and you'll still be able to execute it (though with warnings). That *is* quite a difference, especially when deploying small applications.

>   -- relying on package management which is what every Linux distro does
> 
> (...)
> 
> PS For the latter point, our .deb based R package currently shows this:
> 
> (...)
> 
> Depends: zip, unzip, libpaper-utils, xdg-utils, libblas3 | libblas.so.3, libbz2-1.0, libc6 (>= 2.23), libcairo2 (>= 1.6.0), libcurl3 (>= 7.28.0), libglib2.0-0 (>= 2.12.0), libgomp1 (>= 4.9), libjpeg8 (>= 8c), liblapack3 | liblapack.so.3, liblzma5 (>= 5.1.1alpha+20120614), libpango-1.0-0 (>= 1.14.0), libpangocairo-1.0-0 (>= 1.14.0), libpcre3, libpng12-0 (>= 1.2.13-4), libreadline6 (>= 6.0), libtcl8.6 (>= 8.6.0), libtiff5 (>= 4.0.3), libtk8.6 (>= 8.6.0), libx11-6, libxt6, zlib1g (>= 1:1.1.4), ucf (>= 3.0), ca-certificates

Sure, package dependencies would be great as well - at least you'd be sure that users of, say, Debian-based distros will be able to run this portable R, as long as they've installed the required libraries. But notice that in your example package versions equal *or greater* than listed are required - so if someone has upgraded their system, they still will be able to run that R. With a version built from source you need *exactly* the same version as on the machine where R was compiled. Hence my question: how come the precompiled distribution of R has "less strict" library requirements than manually compiled versions?

Best,
Pawel



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