[Rd] Notes on building a gcc toolchain for Rtools (but not multilib)
tangoh at gmail.com
Mon Mar 9 03:02:30 CET 2015
[This is a follow-up to the "New version of Rtools for Windows" thread
in January, but I just subscribed and don't know how to reply to an
old thread -- my apologies.]
I was able to use the nuwen distro to build a gcc 4.9.2 toolchain and
use it to build the latest R-patched with it.
Below are some notes about what I did; I hope they will be useful for
keeping Rtools up-to-date.
- This is 64-bit only; I tried but was unable to create a multilib toolchain
- I did not run any tests on the resulting R binary, other than
starting R and running some basic commands
- I don't necessarily know what I'm doing!
Outline of steps:
- The (nicely done!) nuwen website by Stephan Lavavej has made
available a MinGW distro and the scripts used to create it.
+ However, the gcc toolchain there is built with --disable-lib32 (so
no multilib) and with --disable-gomp (the default)
+ Moreover, the pthreads library is not included in the distro
+ I believe building R requires GOMP and pthreads, hence I tried to
modify the scripts to add these
- Installing your own toolchain
+ Read the instructions in the section "How To Build Your Own Distro"
+ You don't have to rebuild everything in components-12.2.7z: you
only need the original binutils-2.25.7z and your own build of
mingw-w64+gcc.7z to replace Rtools's gcc
+ You will need to run a modified version of Stephan's
mingw-w64+gcc.sh script. Besides the gcc source code, you will also
need to download the pthreads-w32 source code from
+ Here are the changes I made to the mingw-w64+gcc.sh script:
diff --git a/mingw-w64+gcc.sh b/mingw-w64+gcc.sh
index 2402ffc..fd44e76 100644
@@ -8,6 +8,7 @@ source 0_append_distro_path.sh
7z x '-oC:\Temp\gcc' gmp-6.0.0a.tar > NUL || fail_with gmp-6.0.0a.tar
- EPIC FAIL
7z x '-oC:\Temp\gcc' mpfr-3.1.2.tar > NUL || fail_with mpfr-3.1.2.tar
- EPIC FAIL
7z x '-oC:\Temp\gcc' mpc-1.0.2.tar > NUL || fail_with mpc-1.0.2.tar - EPIC FAIL
+7z x '-oC:\Temp\gcc' pthreads-w32-2-9-1-release.tar > NUL ||
fail_with pthreads-w32-2-9-1-release.tar - EPIC FAIL
patch -Z -d /c/temp/gcc/mpfr-3.1.2 -p1 < mpfr.patch
@@ -25,6 +26,14 @@ make all install "CFLAGS=-s -O3" || fail_with
mingw-w64 make - EPIC FAIL
rm -rf build src
+# Build pthreads-w32.
+make clean GC
+cp libpthreadGC2.a ../dest/x86_64-w64-mingw32/lib/libpthread.a
+cp pthread.h sched.h semaphore.h ../dest/x86_64-w64-mingw32/include
+cp pthreadGC2.dll $X_DISTRO_ROOT/bin/
# Prepare to build gcc - set up the in-tree builds of gmp, mpfr, and mpc.
mv gcc-4.9.2 src
mv gmp-6.0.0 src/gmp
@@ -40,7 +49,7 @@ cp -r dest/x86_64-w64-mingw32/include
-../src/configure --enable-languages=c,c++ --build=x86_64-w64-mingw32
--with-sysroot=/c/temp/gcc/dest --disable-libstdcxx-pch --disable-lto
--disable-nls --disable-shared --disable-win32-registry
--enable-checking=release --with-tune=haswell || fail_with gcc
configure - EPIC FAIL
--disable-libstdcxx-pch --disable-lto --disable-nls --disable-shared
--disable-win32-registry --enable-libgomp --enable-checking=release
--with-tune=haswell || fail_with gcc configure - EPIC FAIL
# --enable-languages=c,c++ : I want C and C++ only.
# --build=x86_64-w64-mingw32 : I want a native compiler.
+ After running this script, you'll get your own mingw-w64+gcc.7z.
- You'll need some patience -- the full 3-stage bootstrap of gcc
took 10 hours for me
- You can replace the "make bootstrap" in the script by "make
bootstrap2" to omit the last stage.
+ Install your toolchain:
- If you haven't done so, install Rtools. We will still use the
command line utilities in C:\Rtools\bin
- Make a new directory, e.g., C:\Rtools\nuwen and unpack
binutils-2.25.7z and mingw-w64+gcc.7z there
- Put the above directory in your PATH, in front of any other
toolchain locations such as C:\Rtools\gcc-4.6.3\bin (it may be better
to remove the latter from your PATH)
- Now for the installation of R:
+ Get the latest R-patched sources (rather than 3.1.2, because
Duncan (thanks!) have added some useful changes)
+ Make sure you have the prerequisites for building R (see the R
Installation and Administration Manual)
- In particular, the source files for the recommended packages,
the support files for Tcl, and the "extsoft" headers and libraries
+ In src/gnuwin32, copy MkRules.dist to MkRules.local and apply the
--- MkRules.local 2015-03-02 13:57:38.601903500 -0800
+++ MkRules.local 2015-03-06 10:43:44.708581800 -0800
@@ -52,6 +52,7 @@
# BINPREF =
# prefix for 64-bit: path or x86_64-w64-mingw32-
# BINPREF64 = x86_64-w64-mingw32-
# Others use a -m64 or -m32 option to select architectures
# M_ARCH =
@@ -64,6 +65,7 @@
# 32- or 64-bit Windows?
# WIN = 32
+WIN = 64
# The gcc 4.9.2 64 bit toolchain is set up for the 'medium code'
model and needs
# to remove the .refptr entries from the exports list; this is the default
@@ -135,12 +137,12 @@
# Full paths of extra DLLs that need to be shipped
# DLLs32 = c:/R/bin/pthreadGC2-w32.dll
-# DLLs64 = c:/R/bin64/pthreadGC2-w64.dll
+DLLs64 = c:/MinGW/bin/pthreadGC2.dll
# DLLs32 =
# DLLs64 =
# Define this to 1 if using the gcc 4.9.2 toolchain with dynamic linking
-# COPY_RUNTIME_DLLS =
+COPY_RUNTIME_DLLS = 1
## ====== configuration macros for building MSI installer ===========
+ (I don't know whether the DLLs64 and COPY_RUNTIME_DLLS changes
above are necessary or not. C:/MinGW/bin is where I put the pthreads
DLL that was built earlier)
+ Run "make all recommended". If this works, you should have a
working R, built using your new toolchain!
- I tried using my new R to install Rcpp from source, but this failed
because the R build scripts was not able to determine the right set of
symbols to be exported in the Rcpp DLL. To solve this, edit the file
etc/x64/Makeconf under your R source tree, replacing
NM_FILTER = | sed -e '/.refptr./d'
NM_FILTER = | sed -e '/.refptr./d; /\.weak\./d'
Hope this helps,
More information about the R-devel