[Rd] possible error in rdevel with --enable-strict-barrier?
Matt Dowle
mdowle at mdowle.plus.com
Sat Sep 27 17:59:09 CEST 2014
Hi,
With a fresh Rdevel r66690 (yesterday 26th) in ~/R/Rtrunk I get :
~/R/Rtrunk $ ./configure CC="gcc -std=gnu99 -fsanitize=address"
CFLAGS="-fno-omit-frame-pointer -O0 -g -Wall -pedantic -mtune=native"
--without-recommended-packages
~/R/Rtrunk $ make clean
~/R/Rtrunk $ make
Works fine.
Now adding --enable-strict-barrier to the end :
~/R/Rtrunk $ ./configure CC="gcc -std=gnu99 -fsanitize=address"
CFLAGS="-fno-omit-frame-pointer -O0 -g -Wall -pedantic -mtune=native"
--without-recommended-packages --enable-strict-barrier
~/R/Rtrunk $ make clean
~/R/Rtrunk $ make
... snip ...
building package 'datasets'
make[4]: Entering directory `/home/mdowle/R/Rtrunk/src/library/datasets'
make[4]: Leaving directory `/home/mdowle/R/Rtrunk/src/library/datasets'
Error in stats::ts(t(matrix(data = c(1628.75, 1678.1, 1772.8, 2443.6, :
invalid time series parameters specified
Calls: <Anonymous> ... <Anonymous> -> sys.source -> eval -> eval ->
<Anonymous>
Execution halted
I've done this with and without --enable-strict-barrier several times
and it's repeatable, at least on my machine.
Am I doing it right? Is it known?
~/R/Rtrunk $ gcc -v
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.8/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Debian 4.8.2-1'
--with-bugurl=file:///usr/share/doc/gcc-4.8/README.Bugs
--enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr
--program-suffix=-4.8 --enable-shared --enable-linker-build-id
--libexecdir=/usr/lib --without-included-gettext --enable-threads=posix
--with-gxx-include-dir=/usr/include/c++/4.8 --libdir=/usr/lib
--enable-nls --with-sysroot=/ --enable-clocale=gnu
--enable-libstdcxx-debug --enable-libstdcxx-time=yes
--enable-gnu-unique-object --enable-plugin --with-system-zlib
--disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo
--with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre
--enable-java-home
--with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64
--with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64
--with-arch-directory=amd64
--with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc
--enable-multiarch --with-arch-32=i586 --with-abi=m64
--with-multilib-list=m32,m64,mx32 --with-tune=generic
--enable-checking=release --build=x86_64-linux-gnu
--host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.8.2 (Debian 4.8.2-1)
I should mention that I've also installed gcc 4.9.1 to try combining
ASAN and UBSAN i.e. -fsanitize=undefined,address. So it's possible that
something in that install has upgraded a shared object somewhere else.
In the command above I'm using just "gcc" in CC, though, not "gcc-4.9".
The earlier snipped output confirms it is using gcc 4.8.2.
Anyway, posting here to see if it's just me or if there's really a minor
issue with Rdevel currently.
Thanks,
Matt
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