[Rd] sma installation error
hb at biostat.ucsf.edu
Wed Nov 30 23:02:11 CET 2011
The sma package is deprecated since many years...
...however, by request from collaborators last year, I recompiled it
to fix that error you are mention (see below). I just added a
namespace (required in R 2.14.0). You can download it from:
It pass R CMD check without ERRORs but there are heaps of WARNINGs.
It comes with all possible disclaimers, including that you're on your
own trying to get the package to work. I will *not* help you/anyone
troubleshoot etc - I'm not using it myself and I'm just making it
available as is.
Version: 0.5.17 [2011-11-30]
o Added a namespace.
o Compressed example data using 'R CMD build --resave-data'.
Version: 0.5.16 [2010-12-03]
o PARSE ERROR: A '#' was incorrectly escaped as '\#' in a string.
o The sma package is no longer supported/maintained. The last
official release was v0.5.15 in Nov 2005, cf.
The only reason for v0.5.16 is so that it can be used by
users who still use the aroma package.
Version: 0.5.15 [2005-11--16]
o See http://cran.r-project.org/src/contrib/Archive/sma/
On Wed, Nov 30, 2011 at 12:47 PM, Justin <dlyzxl at yahoo.com> wrote:
> I tried different versions of sma**.tar.gz file either with "R CMD INSTALL -l packagepath sma**.tar.gz", "R INSTALL -l path sma**.tar.gz" and under R windows by "install.packages("sma_0.5.15.tar.gz",repos=NULL)"
> I got same error
> * installing *source* package 'sma' ...
> ** Creating default NAMESPACE file
> Warning in .write_description(db, ldpath) :
> Unknown encoding with non-ASCII data: converting to ASCII
> ** R
> Error : '\#' is an unrecognized escape in character string starting "but the suffixes must be integers 1,2, ..., \#"
> ERROR: unable to collate and parse R files for package 'sma'
> * removing '/home/psgendb/local/pkg/R_language/lib64/R/library/sma'
> Warning message:
> In install.packages("sma_0.5.15.tar.gz", repos = NULL) :
> installation of package 'sma_0.5.15.tar.gz' had non-zero exit status
> My system is Linux cc01 2.6.18-238.19.1.el5 #1 SMP Fri Jul 15 07:31:24 EDT 2011 x86_64 x86_64 x86_64 GNU/Linux
> Can anyone help?
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