[Rd] help with S4 objects: trying to use a "link-glm" as a class in an object definition

[Martin Morgan]

On 01/27/2011 08:51 PM, Paul Bailey wrote:
> Hi,
> 
> I'm trying to make a new S4 object with a slot for a "link-glm" object. R doesn't like me have a slot of class "link-glm"
> 
>> class(make.link("probit"))
> [1] "link-glm"

Tell the S4 system that you'd like to use this 'old' class

setOldClass("link-glm")

and things should be ok. Martin

>> setClass("a",representation(item="link-glm"))
> [1] "a"
> Warning message:
> undefined slot classes in definition of "a": item(class "link-glm") 
>> fa <- function() {
> +   new("a",item=make.link("probit"))
> + }> 
>> fa()
> Error in validObject(.Object) : 
>   invalid class "a" object: undefined class for slot "item" ("link-glm")
> 
> # and a link-glm looks like a list to me, so I thought I would tell R it is a list and see what happens
> 
>> setClass("b",representation(item="list"))
> [1] "b"
>> fb <- function() {
> +   new("b",item=make.link("probit"))
> + }
>> fb()
> Error in validObject(.Object) : 
>   invalid class "b" object: invalid object for slot "item" in class "b": got class "link-glm", should be or extend class "list"
> 
> Any advice?
> 
> Regards,
> Paul Bailey
> Ph.D. candidate
> Department of Economics
> University of Maryland
> 
> ###### raw code #####
> setClass("a",representation(item="link-glm"))
> fa <- function() {
>   new("a",item=make.link("probit"))
> }
> fa()
> setClass("b",representation(item="list"))
> fb <- function() {
>   new("b",item=make.link("probit"))
> }
> fb()
> ###########
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel


-- 
Computational Biology
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109

Location: M1-B861
Telephone: 206 667-2793