[Rd] S4 package warning
Robin Hankin
rksh1 at cam.ac.uk
Wed Nov 10 10:53:30 CET 2010
Hello everyone. R-2.12.0, suse linux 11.3.
I am debugging a package that uses S4 methods
and R CMD check gives the following warning:
> Warning in methods::findMethods(g, env) :
> non-generic function 'mdm' given to findMethods()
> See the information on DESCRIPTION files in the chapter 'Creating R
> packages' of the 'Writing R Extensions' manual.
I don't see anything obvious in that part of the R-exts but
FWIW, here is my DESCRIPTION file:
> Package: multivator
> Type: Package
> Title: A multivariate emulator
> Version: 1.0-1
> Depends: R(>= 2.10.0), emulator, methods, utils
> Date: 2009-10-27
> Author: Robin K. S. Hankin
> Maintainer: <hankin.robin_nospamAT_gmail.com>
> Description: A multivariate generalization of the emulator package
> License: GPL-2
> LazyLoad: yes
I think that the lines in question in my package are:
> setClass("mdm", # "mdm" == "multivariate design matrix"
> representation = representation(
> xold = "matrix",
> types = "factor"
> )
> )
>
>
> setGeneric("mdm",function(xold,types){standardGeneric("mdm")})
> setMethod("mdm",signature("matrix","factor"),function(xold, types){
> new("mdm", xold=xold, types=types)
> } )
which appear to execute without warning on a virgin console. In the
package, there are three
or four other S4 classes which are on the same footing as the mdm class,
but do not appear to generate a warning from R CMD check.
The same happens AFAICS on R-2.13, 53543
Can anyone advise on how to deal with the warning?
thank you
Robin
--
Robin K. S. Hankin
Uncertainty Analyst
University of Cambridge
19 Silver Street
Cambridge CB3 9EP
01223-764877
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