[Rd] Using multicore with an open pdf device results in corrupt pdf (PR#14186)
Simon Urbanek
simon.urbanek at r-project.org
Fri Jan 15 18:48:10 CET 2010
How is this a bug in R? First, multicore is not R. Second, you're
running multicore with GUI code loaded which it explicitly tells you
that it won't work. Third, the code you provided does produce correct
PDFs (tested on the same platform you provided) in a clean session
(unsurprisingly).
Cheers,
Simon
On Jan 15, 2010, at 9:15 , kollerma at stat.math.ethz.ch wrote:
> The attached code produces corrupted pdfs (test2.pdf, test4.pdf and
> test5.pdf). The resulting pdf depends on how many cores are
> available on
> the machine.
>
> I don't see why there should be any difference between the pdfs
> (exept for
> the timestamp). Doing many operations involving mclapply can
> increase the
> size of the resulting pdf by ten times!
>
> Thank you for checking this.
>
> require(multicore)
>
> pdf('test.pdf')
> y <- unlist(lapply(1:50, identity))
> plot(y)
> print(y)
> dev.off()
>
> options(cores = 3)
>
> pdf('test2.pdf')
> y <- unlist(mclapply(1:50, identity))
> plot(y)
> print(y)
> dev.off()
>
> pdf('test3.pdf')
> y <- unlist(lapply(1:50, identity))
> plot(y)
> print(y)
> dev.off()
>
> options(cores = 2)
>
> pdf('test4.pdf')
> y <- unlist(mclapply(1:50, identity))
> plot(y)
> print(y)
> dev.off()
>
> options(cores = 8)
>
> pdf('test5.pdf')
> y <- unlist(mclapply(1:50, identity))
> plot(y)
> print(y)
> dev.off()
>
>
> --please do not edit the information below--
>
> Version:
> platform = x86_64-unknown-linux-gnu
> arch = x86_64
> os = linux-gnu
> system = x86_64, linux-gnu
> status =
> major = 2
> minor = 10.1
> year = 2009
> month = 12
> day = 14
> svn rev = 50720
> language = R
> version.string = R version 2.10.1 (2009-12-14)
>
> Locale:
> LC_CTYPE
> =
> de_CH
> .UTF
> -8
> ;LC_NUMERIC
> =
> C
> ;LC_TIME
> =
> en_US
> .UTF
> -8
> ;LC_COLLATE
> =
> de_CH
> .UTF
> -8
> ;LC_MONETARY
> =
> C
> ;LC_MESSAGES
> =
> de_CH
> .UTF
> -8
> ;LC_PAPER
> =
> de_CH
> .UTF
> -8
> ;LC_NAME
> =
> C
> ;LC_ADDRESS
> =C;LC_TELEPHONE=C;LC_MEASUREMENT=de_CH.UTF-8;LC_IDENTIFICATION=C
>
> Search Path:
> .GlobalEnv, package:skewt, package:rgl, package:ggplot2,
> package:reshape, package:plyr, package:proto, package:VGAM,
> package:stats4, package:splines, package:latticeExtra,
> package:RColorBrewer, package:doMC, package:multicore,
> package:foreach, package:codetools, package:iterators,
> package:abind, package:seqinr, package:mvbutils, mvb.session.info,
> package:tools, package:robust, package:rrcov, package:pcaPP,
> package:mvtnorm, package:robustbase, package:MASS, package:glmmML,
> package:playwith, package:grid, package:gWidgetsRGtk2,
> package:cairoDevice, package:lattice, package:gWidgets,
> package:graphics, package:grDevices, package:datasets,
> package:fortunes, package:sfsmisc, package:stats, package:utils,
> package:methods, Autoloads, package:base
>
> ______________________________________________
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> https://stat.ethz.ch/mailman/listinfo/r-devel
>
>
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