[Rd] R 2.9.0 devel: package installation with configure-args option
Prof Brian Ripley
ripley at stats.ox.ac.uk
Tue Mar 3 18:44:50 CET 2009
That version of R is 'under development' and the INSTALL file says
## FIXME: this loses quotes, so filepaths with spaces in get broken up
so it is I think the same as a known issue.
The whole package installation process has been completely
reconstructed for R-devel, and the process is not quite finished.
And this is a low priority as there are effective workarounds.
On Tue, 3 Mar 2009, ml-it-r-devel at epigenomics.com wrote:
>
> Hi,
>
> trying
> to install a package containing C code and requiring non-default configure argument
> settings the incantation (this has worked for R <= 2.8.1 on the same architectures)
>
> R CMD INSTALL --configure-args="--with-opt1 --with-opt2" packname
>
> does always result in a warning
> Warning: unknown option '--with-opt2'
>
> and consequently the option is ignored. Reverting the order of options results in the now
> last option to be ignored. Alternative quoting has not provided a solution.
>
> Using
>
> R CMD INSTALL --configure-args=--with-opt1 --configure-args=--with-opt2 packname
>
> does provide a workaround, though. Is this the (new to me) and only intended way to
> provide more than one configure argument?
> I checked ?INSTALL and the referenced R-admin sec. 'Configuration variables' but still am
> not clear on this.
>
> Regards, Matthias
>
>
> R version 2.9.0 Under development (unstable) (2009-03-02 r48041)
> on Ubuntu 8.04, 8.10
>
> --
> Matthias Burger Project Manager/ Biostatistician
> Epigenomics AG Kleine Praesidentenstr. 1 10178 Berlin, Germany
> phone:+49-30-24345-0 fax:+49-30-24345-555
> http://www.epigenomics.com matthias.burger at epigenomics.com
> --
> Epigenomics AG Berlin Amtsgericht Charlottenburg HRB 75861
> Vorstand: Geert Nygaard (CEO/Vorsitzender)
> Oliver Schacht PhD (CFO)
> Aufsichtsrat: Prof. Dr. Dr. hc. Rolf Krebs (Chairman/Vorsitzender)
>
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>
--
Brian D. Ripley, ripley at stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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