[Rd] R package Matrix failing to build with R-devel on Ubuntu AMD64
Mark W Kimpel
mwkimpel at gmail.com
Wed Jan 30 05:14:30 CET 2008
Switched back to R-devel tonight after using R-2.6.1 for awhile and when
I updated my devel packages Matrix installation failed. Not critical for
me but thought I should report it. I am using Ubuntu Gusty AMD64 OS.
Tail of install output and sessionInfo follows. Mark
Loading required package: methods
Loading required package: lattice
Attaching package: 'Matrix'
The following object(s) are masked from package:stats :
xtabs
Error in new("dgCMatrix") :
trying to generate an object from a virtual class ("dgCMatrix")
Calls: <Anonymous> ... eval.parent -> eval -> eval -> eval -> eval ->
new -> .Call
Execution halted
ERROR: installing package indices failed
** Removing '/home/mkimpel/R_HOME/site-library/Matrix'
** Restoring previous '/home/mkimpel/R_HOME/site-library/Matrix'
The downloaded packages are in
/tmp/RtmpJviXfF/downloaded_packages
Warning message:
In install.packages("Matrix") :
installation of package 'Matrix' had non-zero exit status
> sessionInfo()
R version 2.7.0 Under development (unstable) (2008-01-29 r44238)
x86_64-unknown-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
attached base packages:
[1] tools stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] Biobase_1.17.8
loaded via a namespace (and not attached):
[1] tcltk_2.7.0
--
Mark W. Kimpel MD ** Neuroinformatics ** Dept. of Psychiatry
Indiana University School of Medicine
15032 Hunter Court, Westfield, IN 46074
(317) 490-5129 Work, & Mobile & VoiceMail
(317) 204-4202 Home (no voice mail please)
mwkimpel<at>gmail<dot>com
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