[Rd] Incomplete ouput with sink and split=TRUE e.g. with writeLines (PR#10713)
jo.irisson at gmail.com
jo.irisson at gmail.com
Wed Feb 6 15:45:04 CET 2008
Full_Name: Jean-Olivier Irisson
Version: 2.6.1
OS: OS X 10.5.1, Linux FC 8
Submission from: (NULL) (194.167.139.32)
Example steps:
> sink("test1.txt")
> cat("foo\n")
> writeLines("bar\n")
> sink()
> sink("test2.txt", split=T)
> cat("foo\n")
foo
> writeLines("bar\n")
> sink()
And the content of the files are:
$ head test*
==> test1.txt <==
foo
bar
==> test2.txt <==
foo
bar
So all the output is correctly directed to the file connection but only some of
it is directed to the console (cat but not writeLines). This can be a problem
with writeLines but Duncan Murdoch on R-help stated that: "it is probably a sign
of a bigger problem in sink()".
Real life example:
> sink("test3.txt", split=T)
> t.test(runif(10),round(runif(10)*2))
data: runif(10) and round(runif(10) * 2)
alternative hypothesis: true difference in means is not equal to 0
95 percent confidence interval:
-0.9403446 0.2048443
sample estimates:
mean of x mean of y
0.5322499 0.9000000
> sink()
$ head test3.txt
Welch Two Sample t-test
data: runif(10) and round(runif(10) * 2)
t = -1.3766, df = 14.103, p-value = 0.1901
alternative hypothesis: true difference in means is not equal to 0
95 percent confidence interval:
-0.9403446 0.2048443
sample estimates:
mean of x mean of y
Thank you in advance for your help.
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