[Rd] install packages RMySQL fail
Juan Santiago Ramseyer
juan_sr at uol.com.br
Sun Oct 29 16:58:02 CET 2006
install packages RMySQL fail.
System Fedora Core 6 x86_64
see down. It's bug or incomplete install MySQL?
Juan.
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PROMPT MySQL
$ mysql
Welcome to the MySQL monitor. Commands end with ; or \g.
Your MySQL connection id is 2 to server version: 5.0.22
Type 'help;' or '\h' for help. Type '\c' to clear the buffer.
mysql>
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PROMPT R INSTALLING RMySQL
> install.packages()
tentando a URL
'http://www.insecta.ufv.br/CRAN/src/contrib/RMySQL_0.5-10.tar.gz'
Content type 'application/x-tar' length 142671 bytes
URL aberta
==================================================
downloaded 139Kb
* Installing *source* package 'RMySQL' ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for compress in -lz... yes
checking for getopt_long in -lc... yes
checking for mysql_init in -lmysqlclient... no
checking for mysql.h... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for /usr/local/include/mysql/mysql.h... no
checking for /usr/include/mysql/mysql.h... yes
Configuration error:
could not find the MySQL installation include and/or library
directories. Manually specify the location of the MySQL
libraries and the header files and re-run R CMD INSTALL.
INSTRUCTIONS:
1. Define and export the 2 shell variables PKG_CPPFLAGS and
PKG_LIBS to include the directory for header files (*.h)
and libraries, for example (using Bourne shell syntax):
export PKG_CPPFLAGS="-I<MySQL-include-dir>"
export PKG_LIBS="-L<MySQL-lib-dir> -lmysqlclient"
Re-run the R INSTALL command:
R CMD INSTALL RMySQL_<version>.tar.gz
2. Alternatively, you may pass the configure arguments
--with-mysql-dir=<base-dir> (distribution directory)
or
--with-mysql-inc=<base-inc> (where MySQL header files reside)
--with-mysql-lib=<base-lib> (where MySQL libraries reside)
in the call to R INSTALL --configure-args='...'
R CMD INSTALL --configure-args='--with-mysql-dir=DIR'
RMySQL_<version>.tar.gz
ERROR: configuration failed for package 'RMySQL'
** Removing '/usr/lib64/R/library/RMySQL'
The downloaded packages are in
/tmp/Rtmpioa2vr/downloaded_packages
Warning message:
installation of package 'RMySQL' had non-zero exit status in:
install.packages()
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