[Rd] Build R with ATLAS
Jennifer Lai
lai at lindaspaces.com
Fri Sep 2 15:08:37 CEST 2005
Hi,
I followed this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028942.html, to
compile ATLAS with gcc and g77 on AMD Opteron. I then followed the
instructions on this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028966.html, to
convert static libraries to dynamic libraries.
However, when I tried to configure R-devel, I got the following error
messages in config.log:
configure:33172: checking for sgemm_ in -lf77blas
configure:33210: /usr/pgi/linux86-64/6.0/bin/pgcc -o conftest -g -O2
-mieee-fp -I/usr/pgi/linux86-64/6.0/include -I/usr/pgi/l\
inux86-64/6.0/include/CC -L/usr/pgi/linux86-64/6.0/libso -L/usr/lib64
-L/usr/local/lib64 conftest.c -lf77blas -latlas -lpgftn\
rtl -lnspgc -lpgc -lm -ldl -lm >&5
pgcc-Warning-Unknown switch: -mieee-fp
NOTE: your evaluation license will expire in 14 days, 0.426 hours.
For a permanent license, please read the order acknowledgement
that you received. Connect to https://www.pgroup.com/License with
the username and password in the order acknowledgement.
Name: lai
User: lai
Email: lai at lindaspaces.com
Hostid: PGI=00001AE0190CAB621CB217
/usr/local/lib64/libf77blas.so: undefined reference to `e_wsfe'
/usr/local/lib64/libf77blas.so: undefined reference to `do_fio'
/usr/local/lib64/libf77blas.so: undefined reference to `s_stop'
/usr/local/lib64/libf77blas.so: undefined reference to `s_wsfe'
My LD_LIBRARY_PATH=/usr/pgi/linux86-64/libso:/usr/local/lib64
Can anyone advise me on how to build R with ATLAS?
Thanks,
Jennifer
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