[Rd] (not just!) Windows R CMD build <pkg> leftovers
Martin Morgan
mtmorgan at fhcrc.org
Thu Dec 1 18:34:55 CET 2005
Perhaps this earlier post slipped through the cracks? My apologies if
it's still 'in process', or I missed a response, or if the
contribution isn't helpful.
At any rate, I realized that the problem is not windows-specific.
Also, generating $libdir by calling (a sligthly modified) R_tempfile
might give installation more of a fighting chance in a cluttered TMPDIR.
Index: src/scripts/build.in
===================================================================
--- src/scripts/build.in (revision 36565)
+++ src/scripts/build.in (working copy)
@@ -76,7 +76,7 @@
my $R_platform = R_getenv("R_PLATFORM", "unknown-binary");
my $gzip = R_getenv("R_GZIPCMD", "gzip");
my $tar = R_getenv("TAR", "tar");
-my $libdir = &file_path(${R::Vars::TMPDIR}, "Rinst.$$");
+my $libdir = R_tempfile("Rinst.");
my $INSTALL_opts = "";
$INSTALL_opts .= " --use-zip" if $opt_use_zip;
@@ -434,6 +434,8 @@
if($doit && R_system($cmd)) {
$log->error();
$log->print("Installation failed.\n");
+ $log->print("Removing '$libdir'\n");
+ rmtree($libdir);
exit(1);
}
my $R_LIBS = $ENV{'R_LIBS'};
Index: share/perl/R/Utils.pm
===================================================================
--- share/perl/R/Utils.pm (revision 36565)
+++ share/perl/R/Utils.pm (working copy)
@@ -75,7 +75,7 @@
$pat . $$ . sprintf("%05d", rand(10**5)));
my $n=0;
- while(-f $retval){
+ while(-e $retval){
$retval = file_path($R::Vars::TMPDIR,
$pat . $$ . sprintf("%05d", rand(10**5)));
croak "Cannot find unused name for temporary file"
Martin Morgan <mtmorgan at fhcrc.org> writes:
> A command
>
> R CMD build <pkg>
>
> that fails, e.g., because of C code compilation errors, leaves a
> directory %TMPDIR%/Rinst.xxx containing the file R.css. Although R
> CMD INSTALL --build cleans up after itself, build does not. A fix is
> below. Also, build.in references Rcmd.exe, which I thought was no
> longer necessary?
>
> Index: build.in
> ===================================================================
> --- build.in (revision 36450)
> +++ build.in (working copy)
> @@ -434,6 +434,8 @@
> if($doit && R_system($cmd)) {
> $log->error();
> $log->print("Installation failed.\n");
> + $log->print("Removing '$libdir'\n");
> + rmtree($libdir);
> exit(1);
> }
> my $R_LIBS = $ENV{'R_LIBS'};
>
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