[Rd] termplot has problems with a single term (fix included)
(PR#6679)
Peter Dalgaard
p.dalgaard at biostat.ku.dk
Thu Mar 18 22:01:12 MET 2004
tlumley at u.washington.edu writes:
> On Thu, 18 Mar 2004 k.hansen at biostat.ku.dk wrote:
>
> > The bug exists on R-1.9.0-alpha compiled the 10/3.
> >
> > Termplot has a problem if either the model only contains a single term
> > or if asked to plot a single term. In addition there are problems with
> > the option se = TRUE.
>
> I can't reproduce this in either R-devel or 1.8.1, and termplot hasn't
> changed since January.
>
> I do
> example(termplot)
...
> without any error messages. I also note that termplot() doesn't
> (anymore) start with the line you say it starts with, though it did until
> January.
>
> Could you provide an example?
The original story was this (which I saw but lacked the time to analyze):
library(survival)
library(MASS)
library(splines)
data(Melanoma)
men<-Melanoma[Melanoma$status<3,]
y<-coxph(Surv(time,status) ~ sex + ns(thickness,df=4),data=men)
z<-coxph(Surv(time,status) ~ ns(thickness,df=4),data=men)
termplot(y) #OK
termplot(z) # Prints a ? prompt (from parse(text=nmt) w/nmt==NULL)
termplot(y,terms=2) # Same
This can still be seen with the current devel version.
--
O__ ---- Peter Dalgaard Blegdamsvej 3
c/ /'_ --- Dept. of Biostatistics 2200 Cph. N
(*) \(*) -- University of Copenhagen Denmark Ph: (+45) 35327918
~~~~~~~~~~ - (p.dalgaard at biostat.ku.dk) FAX: (+45) 35327907
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