R-1.6.1, Mac OS X 10.2.2 build failure
Jan de Leeuw
deleeuw@stat.ucla.edu
Thu, 14 Nov 2002 14:40:43 -0800
The dlcompat and g77 in darwinports (that Greg seems to be using)
are different from the ones in fink.
On Thursday, November 14, 2002, at 02:34 PM, Luke Tierney wrote:
> You might want to double check the dlcompat you have. THere was some
> discussiion about this a week or two ago in conneciton with plain
> darwin I think. Mac compilers prepend underscores to C names; most
> other systems don't. R's config assumes that R has to prepend an
> underscore. But as I recall you can configure dlcompat to do that for
> you, and if that is what you have then you are getting two underscores
> instead of one. Don't know if that is the problem, but it's something
> to check.
>
> luke
>
> On Thu, 14 Nov 2002, Gregory Wright wrote:
>
>>
>> On Thursday, November 14, 2002, at 12:35 PM, Jan de Leeuw wrote:
>>
>>> I know what I would do. It does not rebuild "methods". I would do a
>>> make distclean in your build directory and configure from scratch.
>>>
>>>
>>>
>>
>> Hi,
>>
>> I unpacked a fresh 1.6.1 tarball, reconfigured and rebuilt from
>> scratch. The results were similar:
>>
>> <...stuff omitted..>
>> cc1: warning: changing search order for system directory
>> "/usr/local/include"
>> cc1: warning: as it has already been specified as a non-system
>> directory
>> gcc -no-cpp-precomp -I../../../../include -I/usr/local/include
>> -fno-common -g -O2 -c methods_list_dispatch.c -o
>> methods_list_dispatch.o
>> cc1: warning: changing search order for system directory
>> "/usr/local/include"
>> cc1: warning: as it has already been specified as a non-system
>> directory
>> gcc -no-cpp-precomp -I../../../../include -I/usr/local/include
>> -fno-common -g -O2 -c method_meta_data.c -o method_meta_data.o
>> cc1: warning: changing search order for system directory
>> "/usr/local/include"
>> cc1: warning: as it has already been specified as a non-system
>> directory
>> gcc -no-cpp-precomp -I../../../../include -I/usr/local/include
>> -fno-common -g -O2 -c slot.c -o slot.o
>> cc1: warning: changing search order for system directory
>> "/usr/local/include"
>> cc1: warning: as it has already been specified as a non-system
>> directory
>> gcc -no-cpp-precomp -I../../../../include -I/usr/local/include
>> -fno-common -g -O2 -c class_support.c -o class_support.o
>> cc1: warning: changing search order for system directory
>> "/usr/local/include"
>> cc1: warning: as it has already been specified as a non-system
>> directory
>> gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o
>> methods.so do_substitute_direct.o methods_list_dispatch.o
>> method_meta_data.o slot.o class_support.o
>> mkdir -p -- ../../../../library/methods/libs
>> dumping R code in package 'methods'
>> Error in .Call("R_initialize_methods_metadata", table, PACKAGE =
>> "methods") :
>> .Call function name not in load table
>> Execution halted
>> make[4]: *** [../../../library/methods/R/all.rda] Error 1
>> make[3]: *** [all] Error 2
>> make[2]: *** [R] Error 1
>> make[1]: *** [R] Error 1
>> make: *** [R] Error 1
>>
>> The configuration was
>>
>> bash-2.05a$ export TCLTK_LIBS="-framework Tcl -framework Tk"
>> bash-2.05a$ export
>> TCLTK_CPPFLAGS="-I/Library/Frameworks/Tcl.framework/Headers
>> -I/Library/Frameworks/Tk.framework/Headers"
>> ../configure
>> --with-tcl-config=/Library/Frameworks/Tcl.framework/tclConfig.sh
>> --with-tk-config=/Library/Frameworks/Tk.framework/tkConfig.sh
>>
>>
>> and configure's summary was
>>
>> R is now configured for powerpc-apple-darwin6.2
>>
>> Source directory: .
>> Installation directory: /usr/local
>>
>> C compiler: gcc -g -O2
>> C++ compiler: g++ -g -O2
>> Fortran compiler: g77 -g -O2
>>
>> X11 support: yes
>> Gnome support: no
>> Tcl/Tk support: yes
>> Readline support: yes
>>
>> R profiling support: yes
>> R as a shared library: no
>>
>> Recommended packages: yes
>>
>>
>> Is there something obvious that I should be examining to find the root
>> of the this?
>>
>> Best Wishes,
>> Greg Wright
>>
>> -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-
>> .-.-.-.-.-
>> r-devel mailing list -- Read
>> http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html
>> Send "info", "help", or "[un]subscribe"
>> (in the "body", not the subject !) To:
>> r-devel-request@stat.math.ethz.ch
>> _._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._.
>> _._._._._
>>
>
> --
> Luke Tierney
> University of Iowa Phone: 319-335-3386
> Department of Statistics and Fax: 319-335-3017
> Actuarial Science
> 241 Schaeffer Hall email: luke@stat.uiowa.edu
> Iowa City, IA 52242 WWW: http://www.stat.uiowa.edu
>
>
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu
homepage: http://gifi.stat.ucla.edu
------------------------------------------------------------------------
-------------------------
No matter where you go, there you are. --- Buckaroo Banzai
http://gifi.stat.ucla.edu/sounds/nomatter.au
------------------------------------------------------------------------
-------------------------
-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-
r-devel mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html
Send "info", "help", or "[un]subscribe"
(in the "body", not the subject !) To: r-devel-request@stat.math.ethz.ch
_._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._