[Rd] Bug in read.table() (PR#1477)
richard_raubertas@merck.com
richard_raubertas@merck.com
Tue, 23 Apr 2002 15:55:34 +0200 (MET DST)
The following command,
temp <- read.table("c:/rfr/r/test.txt")
reads the text file "test.txt", which contains the following lines:
21437
21438
21419-2
21420-2
21421-2
21422-2
and produces the following result:
> temp
V1
1 21437+0i
2 21438+0i
3 0+0i
4 0+0i
5 0+0i
6 0+0i
>
These "numbers" are actually sample ID's, and I expected the presence of the
hyphen would
cause temp to be character or a factor, but it ends up as complex numbers.
System info:
platform i386-pc-mingw32
arch x86
os Win32
system x86, Win32
status
major 1
minor 4.1
year 2002
month 01
day 30
language R
>
Following is a diagnosis of the problem by one of my colleagues:
> From: Huntsinger, Reid
> Sent: Monday, April 22, 2002 5:15 PM
> To: Raubertas, Richard
> Subject: RE: R problem
>
> [ ... ] This happens
> because of the attempt to convert. The function type.convert
> is called on columns with unspecified types; this tries to
> convert to "logical, integer, numeric or complex" in that
> order (first one that is successful wins). You have some ids
> like 21428-2 which type.convert doesn't like as numeric but
> will treat as complex. This in turn is due to R's hand-rolled
> "strtoc" function, which returns 0+0i for something it
> doesn't like. This is a valid value, so the conversion
> "works", and all values are converted this way...
>
> You or I should probably alert the R people. That's not very
> good behavior.
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