[Rd] akima core dumps on loading (PR#521)
Peter Dalgaard BSA
p.dalgaard@biostat.ku.dk
17 Apr 2000 12:03:19 +0200
santini@dsi.unimi.it writes:
> Full_Name: Massimo santini
> Version: 1.0.1
> OS: Linux
> Submission from: (NULL) (159.149.147.89)
>
>
> I've just dl the .rpm of R 1.0.1, installed it and then launched
>
> insatll.packages("akima")
>
> after re-launching R [--vanilla], the command
>
> library(akima)
>
> has the only effect to coredump the program. Here is the output of gdb and
> strace...
Hmm. Doesn't happen here. (BTW: Remember to include as much
information about your system as you can think of. It's not obvious
whether you're running RedHat or SuSE for instance and in what
version.)
> Program received signal SIGSEGV, Segmentation fault.
> _dl_lookup_symbol (undef_name=0x2d2e3b3 <Address 0x2d2e3b3 out of bounds>,
> ref=0xbfffabb4,
> symbol_scope=0x81ec65c, reference_name=0x81e8b20
> "/usr/lib/R/library/akima/libs/akima.so", reloc_type=208)
> at ../sysdeps/generic/dl-hash.h:31
> 31 ../sysdeps/generic/dl-hash.h: No such file or directory.
> (gdb)
>
> --- STRACE (echo "library(akima)" | strace R --vanilla)
>
> [...]
> rt_sigprocmask(SIG_BLOCK, NULL, [], 8) = 0
> stat("/usr/lib/R/library/akima/libs/akima.so", {st_mode=S_IFREG|0755,
> st_size=289367, ...}) = 0
> stat("/usr/lib/R/library/base/libs/akima.so", 0xbfffdb60) = -1 ENOENT (No such
> file or directory)
This would seem to be the problem: the dynamic library isn't there.
Did you get any error messages while compiling the package? (Except
for "...might be used uninitialized..." of which there are quite a few
here too).
--
O__ ---- Peter Dalgaard Blegdamsvej 3
c/ /'_ --- Dept. of Biostatistics 2200 Cph. N
(*) \(*) -- University of Copenhagen Denmark Ph: (+45) 35327918
~~~~~~~~~~ - (p.dalgaard@biostat.ku.dk) FAX: (+45) 35327907
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