[ESS-bugs] ess-mode 18.10.2 [Released git: d4cd65da6dbf]; R Process Exits Abnormally (Code 127)
Deivydas Giedrimas
de|vyd@@@g|edr|m@@ @end|ng |rom uconn@edu
Fri Feb 1 18:34:37 CET 2019
Hello,
I cannot find the file "/home/pleo/R_latest/bin/R", nor any mention of it
in my PATH. I am not sure what the R executable should be.
Thank you,
Deivydas
On Fri, Feb 1, 2019 at 11:42 AM Sparapani, Rodney <rsparapa using mcw.edu> wrote:
> Hi Deivydas:
>
> If it exists, what kind of file is /home/pleo/R_latest/bin/R? Is it in
> your PATH?
> Is the appropriate R executable in your PATH? Before or after the above
> file?
> The answers to these questions might shed some light on your predicament.
>
> Thanks,
>
> Rodney
>
> -----Original Message-----
> From: ESS-core <ess-core-bounces using r-project.org> on behalf of Deivydas
> Giedrimas <deivydas.giedrimas using uconn.edu>
> Date: Friday, February 1, 2019 at 4:46 AM
> To: "ess-bugs using r-project.org" <ess-bugs using r-project.org>
> Subject: [ESS-bugs] ess-mode 18.10.2 [Released git: d4cd65da6dbf]; R
> Process Exits Abnormally (Code 127)
>
> ATTENTION: This email originated from a sender outside of MCW. Use
> caution when clicking on links or opening attachments.
> ________________________________
>
> When trying to start the inferior R session, I am presented with the
> following error:
> "/Applications/Emacs.app/Contents/MacOS/Emacs-x86_64-10_10:
> /home/pleo/R_latest/bin/R: No such file or directory
> at Thu Jan 31 18:15:57 2019"
>
> -------------------------------------------------------
> This bug report will be sent to the ESS bugs email list
> Press C-c C-c when you are ready to send your message.
> -------------------------------------------------------
>
> [ess-site:] ess-lisp-directory =
> '/Applications/Emacs.app/Contents/Resources/site-lisp/ess'[ess-site.el]:
> ess-customize-alist=nil
> [ess-site.el _2_]: ess-customize-alist=nil
> Creating global Emacs toolbar[ess-site:] *very* end ...
> (R): ess-dialect=nil, buf=org, start-arg=nil
> current-prefix-arg=nil
> (inf-ess 1): lang=nil, dialect=nil, tmp-dialect=R, buf=org
> (inf-ess 1.1): procname=R temp-dialect=R, buf-name=*R*
> (inf-ess 2.0) Method #3 start=/Users/deivydas/assay_comp/ buf=*R*
> (inf-ess 2.1): ess-language=S, ess-dialect=R buf=*R*
> (i-ess 1): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (i-ess end): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (inf-ess 3.0): prog=/home/pleo/R_latest/bin/R,
> start-args=--no-readline --no-save , echoes=t
> Making Process...Buf *R*, :Proc R, :Prog /home/pleo/R_latest/bin/R
> :Args= --no-readline --no-save
> Start File=nil
> (inferior-ess: waiting for process to start (before hook)
>
> (R): ess-dialect=R, buf=*R*, start-arg=nil
> current-prefix-arg=nil
> (inf-ess 1): lang=S, dialect=R, tmp-dialect=R, buf=*R*
> (inf-ess 1.1): procname=R temp-dialect=R, buf-name=*R*
> (inf-ess 2.0) Method #1 start=/Users/deivydas/assay_comp/ buf=*R*
> (inf-ess 2.1): ess-language=S, ess-dialect=R buf=*R*
> (i-ess 1): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (i-ess end): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (inf-ess 3.0): prog=/home/pleo/R_latest/bin/R,
> start-args=--no-readline --no-save , echoes=t
> Making Process...Buf *R*, :Proc R, :Prog /home/pleo/R_latest/bin/R
> :Args= --no-readline --no-save
> Start File=nil
> (inferior-ess: waiting for process to start (before hook)
>
> (R): ess-dialect=nil, buf=org, start-arg=nil
> current-prefix-arg=nil
> (inf-ess 1): lang=nil, dialect=nil, tmp-dialect=R, buf=org
> (inf-ess 1.1): procname=R temp-dialect=R, buf-name=*R*
> (inf-ess 2.0) Method #3 start=/Users/deivydas/Library/Mobile
> Documents/iCloud~com~appsonthemove~beorg/Documents/org/ buf=*R*
> (inf-ess 2.1): ess-language=S, ess-dialect=R buf=*R*
> (i-ess 1): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (i-ess end): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (inf-ess 3.0): prog=/home/pleo/R_latest/bin/R,
> start-args=--no-readline --no-save , echoes=t
> Making Process...Buf *R*, :Proc R, :Prog /home/pleo/R_latest/bin/R
> :Args= --no-readline --no-save
> Start File=nil
> (inferior-ess: waiting for process to start (before hook)
>
> (R): ess-dialect=R, buf=*R*, start-arg=nil
> current-prefix-arg=nil
> (inf-ess 1): lang=S, dialect=R, tmp-dialect=R, buf=*R*
> (inf-ess 1.1): procname=R temp-dialect=R, buf-name=*R*
> (inf-ess 2.0) Method #1 start=/Users/deivydas/assay_comp/ buf=*R*
> (inf-ess 2.1): ess-language=S, ess-dialect=R buf=*R*
> (i-ess 1): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (i-ess end): buf=*R*, lang=S, comint..echo=t,
> comint..sender=inferior-ess-input-sender,
> (inf-ess 3.0): prog=/home/pleo/R_latest/bin/R,
> start-args=--no-readline --no-save , echoes=t
> Making Process...Buf *R*, :Proc R, :Prog /home/pleo/R_latest/bin/R
> :Args= --no-readline --no-save
> Start File=nil
> (inferior-ess: waiting for process to start (before hook)
> ess-request-a-process: {beginning}
> ... request-a-process:
> major mode inferior-ess-mode; current buff: *R*; ess-language: S,
> ess-dialect: R
> ..start-process-specific: lang:dialect= S:R, current-buf=*R*
>
> (R): ess-dialect=R, buf=*R*, start-arg=nil
> current-prefix-arg=nil
> (inf-ess 1): lang=S, dialect=R, tmp-dialect=R, buf=*R*
>
>
> Emacs : GNU Emacs 26.1 (build 1, x86_64-apple-darwin14.5.0, NS
> appkit-1348.17 Version 10.10.5 (Build 14F2511))
> of 2018-05-30
> Package: ess-mode 18.10.2 [Released git: d4cd65da6dbf]
>
> current state:
> ==============
> (setq
> ess-language "S"
> ess-dialect "R"
> ess-ask-for-ess-directory t
> ess-ask-about-transfile nil
> default-directory "/Users/deivydas/Library/Mobile
> Documents/iCloud~com~appsonthemove~beorg/Documents/org/"
> ess-keep-dump-files t
> ess-source-directory
> "/var/folders/r5/zp5n_0b92mdgrldjqyv4hn8h0000gn/T/"
> ess-use-ido t
> ess-use-eldoc t
> ess-use-tracebug t
> ess-use-auto-complete t
> ess-use-company t
> ess-eval-visibly-p t
> ess-can-eval-in-background t
> ess-local-process-name nil
> )
>
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>
--
*Deivydas Giedrimas*
*University of Connecticut *- CLAS
Biological Sciences, 2020 | Stem Scholar | Honors Program
Core Lab - Undergraduate Researcher
UConn iGEM - Secretary
UConn KDSAP - Community Outreach Chair
deivydas.giedrimas using uconn.edu
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