Dear Bioconductor users,

I´m using the package EasyqpcR to analyze my qPCR data.

Is there any way to extract the standard error calculation values which 
are given by the nrmData function and include them is a data frame for 
example?

Also, if I include the slope calculation in a object ("efficiency") and 
use it in the nrmData function (....E=efficiency...) I get error.

"Error in Ops.data.frame(E1, (ctmeanall1 - ctmean1)) :
   list of length 4 not meaningful"


I solve the thing by creating a data frame:

 >efficiency_dataframe<-efficiency$Efficiency

and use it as argument in the nrmData function.

Is this the way to do?

Thanks for your help!

>sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-w64-mingw32/x64 (64-bit)

locale:
[1] LC_COLLATE=English_United Kingdom.1252  LC_CTYPE=English_United Kingdom.1252
[3] LC_MONETARY=English_United Kingdom.1252 LC_NUMERIC=C
[5] LC_TIME=English_United Kingdom.1252

attached base packages:
[1] graphics  grDevices utils     datasets  stats     methods   base

other attached packages:
[1] ggplot2_1.0.0  EasyqpcR_1.5.0

loaded via a namespace (and not attached):
  [1] colorspace_1.2-4     digest_0.6.4         grid_3.0.2           gtable_0.1.2
  [5] gWidgets_0.0-52      gWidgetsRGtk2_0.0-82 MASS_7.3-29          matrixStats_0.10.0
  [9] munsell_0.4.2        plotrix_3.5-7        plyr_1.8.1           proto_0.3-10
[13] R.methodsS3_1.6.1    Rcpp_0.11.2          reshape2_1.4         RGtk2_2.20.29
[17] scales_0.2.4         stringr_0.6.2        tools_3.0.2



Tommaso

-- 
Tommaso Raffaello, PhD

University of Helsinki
Department of Forest Sciences
Latokartanonkaari 7 PO Box 27
00014 Helsinki (Finland)

Phone number: +358 504486086
email: tommaso.raffaello@helsinki.fi
email: tommaso.raffaello@gmail.com


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