Hi paul,

I mean by relate is how to correlate change in gene expression ,let say log
fold change between time1 and time2 with multivariales  of each cell
culture experiment(enzyme,stimulator concentration,...etc), I tried
correlation test but I got unclear results.

Thank you


On Mon, May 26, 2014 at 12:25 AM, Paul Geeleher <paulgeeleher@gmail.com>wrote:

> I could be missing something here but I don't think its super clear
> what you mean by "relate gene expression with multi variables". It
> might be helpful to elaborate a little.
>
>
> Paul.
>
> On Sun, May 25, 2014 at 9:46 AM, chris Jhon <cjhon217@gmail.com> wrote:
> > Hi,
> >
> >
> > I have genome wide gene expression time series data for 4 time points,i
> > have also   multi variables for each of time point related to cell
> cluture
> > conditions so have tables as follows
> >
> >       time1 time2 time3 time4
> > Var1
> > Var2
> > Var3
> > Var4
> >
> > and gene expression table
> >
> > cell line1    gene1 ...geneN
> > cellline2     gene1     geneN
> >
> > I would like to relate gene expression with multi variables,Any idea?
> >
> > Thank you
> >
> >         [[alternative HTML version deleted]]
> >
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>
>
> --
> Dr. Paul Geeleher, PhD
> Section of Hematology-Oncology
> Department of Medicine
> The University of Chicago
> 900 E. 57th St.,
> KCBD, Room 7144
> Chicago, IL 60637
> --
> www.bioinformaticstutorials.com
>

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